Contemplating a role for titanium in organisms

Mark R. Zierden and Ann M. Valentine *
Department of Chemistry, Temple University, Philadelphia, PA 19122, USA. E-mail: ann.valentine@temple.edu; Fax: +1 215 204 7836; Tel: +1 215 204 1532

Received 31st August 2015 , Accepted 4th November 2015

First published on 12th November 2015


Abstract

Titanium is the ninth most abundant element in the Earth's crust and some organisms sequester it avidly, though no essential biological role has yet been recognized. This Minireview addresses how the properties of titanium, especially in an oxic aqueous environment, might make a biological role difficult to recognize. It further considers how new -omic technologies might overcome the limitations of the past and help to reveal a specific role for this metal. While studies with well established model organisms have their rightful place, organisms that are known avid binders or sequesterers of titanium should be promising places to investigate a biological role.


image file: c5mt00231a-p1.tif

Mark Zierden

Mark Zierden was raised in northern New Jersey, near the New York State border. He earned his BS in chemistry from Stockton University in 2010 where he studied thermochromic nickel complexes with Rogers Barlatt. He also performed research on the glass transitions of alkali-borate glasses under the guidance of Steve Feller at Coe College. He is currently a fifth-year graduate student at Temple University. He has been an NSF GK-12 Fellow and currently volunteers at a local High School teaching lessons and performing demonstrations. He is also the co-host of Stereotopical Chemistry, a chemistry-based podcast, aimed at educating non-scientists about current chemical research. His current research is focused on the binding interactions of several Rhodococcus species with titanium dioxide.

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Ann Valentine

Ann Valentine earned a BS in chemistry in 1993 at the University of Virginia and a PhD in 1998 with Stephen J. Lippard at MIT. She was a postdoctoral fellow with Stephen J. Benkovic at Penn State University from 1998–2001. At Temple University, her research group focuses on how nature manages hydrolysis-prone elements, including titanium. She is the recipient of the 2009 Paul Saltman Award for Metals in Biology and a 2014 American Institute of Chemists Chemical Pioneer Award. She was the 2015 Honors Professor of the Year at Temple University.


1. Introduction

There is no known essential role for titanium in the biology of any organism. However, there are studies across many fields that suggest Ti is at least biologically active.1 Most titanium on Earth is locked up in insoluble minerals, such that one might wonder how titanium could participate in biorelevant chemistry. Titanium is the ninth most abundant element in the crust at 0.6%,2 so even a small percentage of solubilized material presents a large amount of metal.3 Most of the titanium present in the environment exists as rutile, a crystal form of TiO2, or as ilmenite, FeTiO3.3,4 Geologically, titanium is often considered immobile although recent evidence suggests it may be mobile in rocks under weathering conditions5,6 and in soils.7 Soluble titanium ranges from 4 pM in surface ocean waters,8–10 where it is far under-saturated, to 100 μM in hot spring waters.11 In both fresh water and seawater, thermodynamic models assume the predominance of TiO(OH)2.12 Complexation by organic ligands is important in at least some natural environments.1 TiO2 nanoparticles in both fresh water and marine systems agglomerate, forming micrometer size particles, or are incorporated into marine snow where particle feeders may ingest them.13 Taken together, these various environments present the opportunity for organisms to use titanium in the form of soluble hydroxide species, as organically complexed species, or in mineral form.

Proteins have evolved to use the metals that are, or at least were at the time of those proteins' evolution, the most accessible.14–16 Some active centers of metalloenzymes resemble the structures of minerals presumed to be present in precipitates from hydrothermal solutions in the ocean billions of years ago.17,18 Considering this use of available material and the vast abundance of titanium on the planet, it is conceivable that nature might have made use of this element, for example during evolution of the earliest prokaryotes. It is clear that some extant organisms do use and contain titanium in certain structures.

Titanium is capable of biologically interesting chemistry but has inherent characteristics that make it difficult to identify in biological systems. Modern experimental methods offer the possibility of identifying new roles for metals like titanium in bioinorganic chemistry. The metal and its ions bring a set of complications for common separation and -omic techniques. Choice of experimental system will be crucial, whether a well-studied and familiar model system or a lesser-known organism known to be associated with high titanium concentrations.

2. Historical identification of essential elements

Many bioessential elements were identified because humans experienced symptoms from an accidental dietary deficiency, as for iron or cobalt, or exhibited diseases of metal mismanagement, like Wilson's disease for copper. Some metals, like chromium, were rigorously excluded from the diet to look for signs that the excluded metal was essential. Some metal ions in biology have conspicuous properties that make them easy to identify, like the color of blue copper proteins or the multiline EPR spectra of some manganese proteins.

Even in recent years, the list of metals having a native biological role continues to grow. In the oceans where zinc is scarce, a diatom species has a carbonic anhydrase that utilizes cadmium in its active site instead of zinc.19 Some methanotrophs natively feature the usually toxic lanthanides lanthanum and cerium instead of calcium in the active site of their methanol dehydrogenase.20 Each of these discoveries was foreshadowed by the novel metals' binding in the active sites of the class of enzymes in question, cadmium to zinc enzymes and lanthanides to calcium enzymes. But a form with a unique requirement for cadmium and for lanthanide, respectively, was a significant development.

3. Characteristics of titanium relevant to biology

The most stable oxidation state of titanium in an aqueous oxic environment is Ti(IV), which shares characteristics such as ionic radius with Al(III) and Fe(III).1 These metals also share a thermodynamic preference for similar binding sites, though Ti(IV) is more strongly Lewis acidic (Fig. 1).21 Ti(IV) can associate with some Fe(III) proteins. In vitro Ti(IV) binds more tightly than Fe(III) to the iron transport protein human serum transferrin.22 The iron storage protein ferritin can also biomineralize titanium.23,24 Like those other ions, Ti(IV) is prone to hydrolysis and hydrolytic precipitation, though its insolubility is not as extreme as is often assumed.1 Binding to small or large biomolecules increases the solubility of Ti(IV).
image file: c5mt00231a-f1.tif
Fig. 1 Correlation of binding constants for metal binding to human serum transferrin (hTF) with metal Lewis acidity, as quantified by K1 (OH). Filled squares represent experimental values, while open squares represent estimated ones. Adapted from data in ref. 21 and 22.

Turning to kinetics, Ti(IV) complexes exhibit a wide range of ligand exchange rates. Hydroxyl and water ligands are very labile and exchange with rate constants on the order of thousands per second.25 But essentially no exchange is observed when the Ti ligand is the hexadentate siderophore enterobactin.26 Falling somewhere in the middle of these extremes, over minutes to hours, are the rates for exchange with small bioligands like ascorbate or citrate, or with proteins like transferrin.22,27

Just considering the thermodynamic stability and kinetic lability of metal–ligand complexes ignores the powerful compartmentalization control that living cells exhibit over different metal species in vivo.28,29 Some cells use physical compartmentalization to overcome the inherent thermodynamic preferences of a protein binding site. Once a complex is removed from the compartmentalized environment, though, it is important to appreciate the fundamental thermodynamics and kinetics of the metal ion binding to its ligand(s).

4. The possible roles of titanium

Against the backdrop of this fundamental chemistry, Nature would sequester Ti if it were useful to the organism. Some biochemical processes for which titanium might be suitable (or even uniquely excellent) are suggested by the many ways humans and human chemists use this element.

The powerful Lewis acidity of Ti(IV) could be deployed to deprotonate difficult-to-deprotonate substrates in a metalloenzyme active site. As a benchmark to illustrate its power, water molecules coordinated to Ti(IV) are deprotonated below pH 0.1,30 In chemical catalysis outside biology, titanium plays this role often and well, for example as a catalyst for aldol reactions.31

Depending on the ligand environment, a Ti4+/Ti3+ couple would be suitable for low-potential redox, for example in an electron transfer chain or redox metalloenzyme. The potential of the Ti4+/Ti3+ couple in acid is close to 0 V vs. NHE,32 but ligands that tightly bind the oxidized form and stabilize it with respect to hydrolytic precipitation can tune the potential over a range down to at least −1 V.1,33,34

Titanium might assume a role in the construction or repair of soft biomaterials, for example in the acsidians that are avid accumulators of the element. Ascidians are also called tunicates because of their protective covering, the tunic.35 The tunic varies between species but is composed of fibrous cellulose components linked with proteins.36 Metals and polyphenolic secondary metabolites called tunichromes may be involved in tunic formation or wound repair.37 Possible metal ligands in the tunic include the tunichromes, proteins or modified proteins (including those containing DOPA side chains) and carbohydrates. The tunic also contains free wandering blood cells from the ascidian's open circulatory system. Some of these cells have high metal concentrations. Some are high in polyphenol content, and probably contain high concentrations of tunichromes, either with or without associated metals. During wound healing, these cells coagulate and lyse, and electron dense fibers form.38 The metal may have a regulating effect by acting as a stabilizer of the component monomers for polymer formation, as a catalyst for polymerization, or as a regulator of the process.

Titanium minerals are widespread and stable. Titanium dioxide is a widely used pigment, and the oxide forms as a passivating coating when titanium metal and its alloys are used in medical implants.1 Mineralized or biomineralized titanium could provide a protective coating or defense for organisms. One place titanium dioxide has found promising use is in dye-sensitized solar cells.39 It is exciting to think that Nature has had the raw materials to take advantage of this chemistry for billions of years, though no natural TiO2 solar cell is yet known.

Titanium might serve an antimicrobial function for an organism,1 either in the presence or absence of light. UV irradiation of some Ti compounds, especially in aqueous environments, generates singlet oxygen and superoxide anion. Both species are damaging cellular oxidants.

Finally, titanium may afford ultraviolet protection for organisms, in effect forming a sunscreen. TiO2 is used as a commercial sunscreen because of its light-scattering properties. Depending on the identity of the ligand or the size of the particle, light absorption or scattering by a Ti compound or mineral may provide a similar protective effect. The tunic of the ascidian Lissoclinum patella absorbs UV-B (290–320 nm) but not visible light, providing a protective environment for a symbiotic photosynthetic prokaryote.40,41 The symbiont provides oxygen to the ascidian, and cannot survive the UV exposure outside of the tunic. This particular ascidian species has not been associated with elevated Ti levels, though other ascidians are avid accumulators.

5. Detecting titanium

Detecting Ti(IV) can be difficult; it is d0, diamagnetic, and exhibits no EPR signal. Most titanium complexes are colorless or have indistinct ligand-to-metal charge transfer bands in the ultraviolet region. There are no practically useful NMR or radioisotopes,1 and use of X-ray absorption spectroscopy (XAS) has been limited. Older elemental analysis methods such as flame atomic absorption (AA) were relatively insensitive to titanium. Importantly, in such single-element techniques, researchers had to be specifically looking for titanium to find it.

Techniques like Inductively Coupled Plasma – Mass Spectrometry (ICP-MS) are more sensitive than AA and are multi-element. But other kinds of considerations sometimes interfere with the detection of Ti. The excellent international GEOTRACES project42 strives to characterize biogeochemical cycles of many trace elements. A few of the associated studies have focused on titanium,10,43–45 but much of the collection apparatus was constructed from titanium, presumably because it is quite inert and because there was relatively less interest in focusing on Ti as an experimental element.

Finally and in general, the inherent difficulty in characterizing metalloproteomes is well known.46–51 In one important study,46 although no Ti was detected in the growth medium, a relatively high Ti concentration (1.6 μM) was detected in the cytoplasmic extract of Pyrococcus furiosus. This cytoplasmic Ti concentration was fourth among trace metals after Fe, Zn, and W, and was higher than Ni, Co, or Mn. But Ti was no longer detected after a relatively mild anion exchange separation; the fate of the Ti is not clear. Possibly it was not ever bound to protein, or it was very labile. This result led us to consider how the bioinorganic behaviour and properties of titanium might manifest during the application of emerging -omic methods to identify novel metalloproteins.

In a plausible experimental plan, an experimental organism would be chosen, driven by the desire for a well-studied model system or for a system already known to be associated with Ti. The biomolecules would be subjected to a separation method like liquid chromatography or gel electrophoresis. A downstream elemental analysis such as ICP-MS or a metal-specific sensor would identify which biomolecule(s) were associated with titanium. Minimal disruption of binding sites would be necessary. Finally, the biomolecules would be identified by some means. Each of these steps deserves special consideration in light of the properties and aqueous behavior of titanium.

6. Model organisms

There are two options when deciding on where to search for putative titanium metalloproteins: well-studied generic model organisms or established sequesterers of titanium such as diatoms and ascidians. Each of these routes offers distinct advantages.

6.1. Well-studied model organisms

The large body of work on organisms like E. coli and yeast allows for a better chance at identifying proteins using a shotgun style of proteomics.46 Studying the metalloproteomes of P. furiosus, E. coli and S. solfataricus allowed for high throughput and quick identification of isolated proteins. There is some work on the effect of titanium compounds on the growth of yeast.52 But as the cost of genome sequencing continues to decrease, the availability of the organism's full genome ceases to be an impediment to the use of a more unusual system.

6.2. Avid marine sequesterers of titanium

6.2.1. Diatoms. Diatoms cultured in the laboratory sequester Ti from the growth media up to 940 ppm in the whole organism from a media containing 60 ppm titanium53 and given a TiO2 rich diet can have local concentrations of up to 80 wt% in their frustules.54 In native samples Ti has been observed at up to 1254 ppm in the diatom frustule.55 The titanium uptake and incorporation into the frustules happens at the same rate as silicon uptake.56 This incorporation of Ti may explain why dissolved Ti is depleted along with silicon during a spring diatom bloom57 and may contribute to the surface depleted profile of Ti in the ocean.8 This appearance of titanium could simply be due to titanium precipitation onto the frustule, but Ti could be actively incorporated by biomolecules in the organism. The enzymes that direct the biomineralization of silica in diatoms are called silaffins;58 synthetic peptides derived from silaffins,59 and recombinant silaffins60,61 direct TiO2 mineralization given an otherwise soluble source of titanium (Fig. 2).62 Incorporation of titanium into the diatom frustule has bactericidal effects.63
image file: c5mt00231a-f2.tif
Fig. 2 Titania formation by recombinant silafins, rSil1L and rSilC. SEM images of precipitates formed by (a) 53 μM rSil1L (b–d) 32 μM rSilC in sodium phosphate/citrate buffer solution (50 mM, pH 7). In (a) the particles fuse together forming an interconnected network. (b) rSilC-titania contains two different structures; (c) smaller hollow particles and (d) larger particles with frequent cracks. Scale bars: 1 μM (a and c) 20 μM (b) and 5 μM (d). Adapted from ref. 61.
6.2.2. Ascidians. Many ascidian species sequester high concentrations of metal ions, most famously vanadium.64,65 Several species accumulate titanium selectively.66Eudistoma ritteri has exhibited the highest concentration at up to 1500 ppm dry weight.67 In other species, such as Pyura chilensis and Ascidia dispar, somewhat lower amounts of titanium have been detected, but for both species the highest concentration of titanium was detected in their blood cells.68 There is also an equal distribution of titanium in these species' blood cells between the cell membrane and the cytoplasm, whereas iron is amassed almost completely in the cytoplasm. Beyond this sequestration ascidians are noted for their production of secondary metabolites called tunichromes,69 and proteins like ferreascidin70 that feature DOPA catechol moieties that would make them excellent binders of Lewis acidic metal ions such as Ti(IV). Another mechanism of transport for metals in ascidians is a transferrin-like pathway.65 This mechanism has implications for titanium transport as titanium interactions with transferrins have been demonstrated.22
6.2.3. Sabellidae. Like ascidians, sabellidae or feather duster worms have been suggested as useful organisms for monitoring water pollution.71 Members of the sabellidae family build tubes around themselves out of parchment-like material, sand and/or bits of shell.72 The species Eudistylia vancouveri sequesters titanium. It secretes a parchment-like shell but its shell was not examined for metal content.71 Other studies of sabellidae metal content have ignored examination of titanium content.73

6.3. Organisms associated with titanium minerals

Many organisms exploit inorganic minerals for structural support, or as sensors or instruments.74,75 Although titanium minerals are abundant, examples of organisms associating with them are rare. In one classic text on biomineralization, titanium appears on a list of biomineralized elements with a reference to unpublished work by the author on ilmenite found in a prokaryote.74 The identity of the prokaryote is unknown (S. Mann, personal communication).

Organisms produce biominerals with varying degrees of control or collect them as detrital materials from the environment. Mineralization of titanium would require a mechanism for sequestration from the environment and then active direction of mineralization. Collection from the environment would require a specific interaction between molecules on the cell-surface of the organism with the titanium mineral surface. There are a few possibilities about how the latter molecular recognition process might work. Peptides might have evolved to bind specifically to TiO2 mineral surfaces.76,77 Glycopeptides, phosphopeptides and phosphoproteins demonstrate a particularly high affinity for TiO2,78,79 and nucleosides for TiO2/ZrO2.80 The specifics of these biomolecule–surface interactions are being explored.81–83

6.3.1. Insects. Vespa orientalis, a type of hornet, attaches grains of a titanium-containing mineral in each cell of its honeycomb-shaped nest using its saliva (Fig. 3).84–86 The adhered minerals appear to be ilmenite, but titanium was not detected in a random sampling of the soil around the nest.86 It is thought that the mineral may act as a gravity sensor85 or may in fact act as an infrared reflector, as the titanium faces of the minerals appear to be intentionally placed facing into open space.86
image file: c5mt00231a-f3.tif
Fig. 3 ESEM image of a titanium particle (arrow) from the roof of a hornet's comb cell. “S” marks the saliva fibers. Scale bar = 20 μM. Adapted from ref. 86.
6.3.2. TiO2-adhesive bacteria. Nanoparticulate TiO2 biosorption has been observed with E. coli and P. aeruginosa and is postulated to occur more broadly.87–91 Adsorption of the bacteria to the surface has been observed as well as agglomeration of particles on the bacteria. These interactions are facilitated by both siderophores and polysaccharides on the cell surface.

Bacteria from the Mediterranean Sea were isolated by exploiting their ability to adhere to TiO2 very strongly.92 A Gram positive species was isolated, Rhodococcus ruber GIN-1, which adhered to TiO2 selectively over other metal oxides in under 1 min, at pH values between 1 and 9, and at temperatures between 4 and 80 °C.92 Cell adhesion to the mineral was not disrupted by dilute acids, alcohols, and cationic or nonionic detergents. A cell surface homolog of the normally cytosolic protein dihydrolipoamide dehydrogenase was among the proteins implicated in adhesion.93

7. Separations and detection

Biomolecules are often subjected to a separation step and characterized by one of several techniques. Putative titanium biomolecules might fare better or worse than other metallobiomolecules in some of these procedures.

7.1. Separations effect on ion occupancy

7.1.1. Gel electrophoresis. The denaturation process involved with many gel electrophoresis techniques has been shown to lead to partial or even total loss of metal.94,95 Even the use of non-denaturing methods can be problematic as certain buffers can form metal complexes leading to metal loss,94 although recent studies show improvements for certain metals.96 A biomolecule might offer a coordination environment (such as several catechol moieties) that would be much more stable than that offered by a buffer. But many functionalities present in buffers, like phosphates, would bind Ti(IV) and might remove it from a less stable coordination site.
7.1.2. Size exclusion chromatography. This technique may maintain even metalloproteins that are not very stable, because these separations do not involve strong physical interactions between the analyte and the stationary phase. As above, the choice of buffer is key. Phosphate buffers complex several metal ions so Good's buffers have often been preferred. However, typical buffers used in size exclusion chromatography can interact with metals,97 and both HEPES and MOPS can cause zinc and iron release from plasma metalloproteins, which was accredited to their complexation properties.98
7.1.3. Ion exchange chromatography. Ion exchange chromatography is a highly efficient separation method. This technique however introduces the risk of metal displacement by competition with not only the mobile phase but also with the stationary phase.99 Ti–transferrin complex recovery via a strong anion exchange column was significantly lower than that recovered from size exclusion chromatography, which itself was much less than 100%.100

During any of these separation techniques, it would be important to monitor the titanium inventory. If the metal did dissociate from an associated biomolecule, it might bind very tightly to a column or, alternatively, not bind at all, depending on speciation.

7.2. Methods of identification

A variety of techniques can identify new metalloproteins. Simple searches of genomic or proteomic data require prior knowledge of a predicted metal binding sequence, and thus are not suitable for the identification of new motifs.101 Accurate prediction of metalloproteins is limited to closely homologous well-characterized proteins. A recent metallomic study demonstrated that some metal binding motifs have not yet been recognized, even for common biologically relevant metals like iron.46 Phage display identifies sequences with high affinity,102 and phage display has identified TiO2 binding sequences,76,103 but those specific sequences are not apparent in the proteomic databases. There are affinity proteomic methods that allow for detection of proteins in their natural environment,104 but an appropriate affinity material must be chosen. Identifying a metal binding site deep within a folded protein remains a challenge. There are imaging techniques that can be useful in identifying metalloproteins.105,106 Recently, promising metal-specific sensors capable of in vivo detection were developed.107 While each of these methods has its advantages, some of the most versatile methods for identifying and characterizing metalloproteins involve mass spectrometry after protein separations, which we will focus on. The immense growth of available genome sequences has led to a rapid rise in the power of bioinformatics. The combination of this vast knowledge with chromatography and mass spectrometry is a powerful tool in determination of metalloproteins.
7.2.1. Bottom-up identification. The bottom-up mass spectrometric approach is the most commonly used for protein identification and has the distinct advantage of high-throughput methodology. In this method, proteins, either purified or in crude extracts, are proteolytically digested and analysed by mass spectrometry. Tandem mass spectrometry can be used to sequence and characterize the peptides further. This method has also generated the large databases that are searched to identify proteins. But only 50–70% of the peptides of a particular protein are usually identified.108 The method can lead to loss of information about post-translational modifications, particularly phosphates,109 because they can be lost during collision induced dissociation. Phosphorylated proteins may be some of the most important for investigation of titanium mineral binding. Using this method to identify a titanium metalloprotein would require multiple digestions with different enzymes to generate complementary sets of data and a full sequence.
7.2.2. Top-down identification. Top-down methods involve analysis of whole protein molecules by mass spectrometry, usually involving a Fourier transform-ion cyclotron resonance (FT-ICR) instrument.110 This method provides complete sequence coverage. There are no issues with peptide generation and separation, and the MS/MS process can be modified so that post-translational modifications can be preserved, helping with observation of isoforms.111 This method does however require large quantities of purified protein and the data are highly complex due to the multiply charged ions and the possibility of overlapping peptide ion envelopes. The main concern with top-down proteomics regarding titanium is the lack of high-throughput discovery.

8. Conclusion

Much data suggests that titanium is biologically relevant but it has not been demonstrated to be essential for any organism. Evolution has directed proteins to use accessible metals and the abundance of titanium mineral and dissolved titanium argues for the existence of a titanium metalloprotein. The high concentrations of titanium in organisms and the chemical processes it is known to participate in support this idea. The identification of a true titanium metalloprotein is not an easy task. Titanium is normally a difficult metal to handle in an aqueous oxic environment. Attempting to manipulate a putative titanium metalloprotein without disturbing its protein environment complicates matters. The considerations outlined here for titanium apply more generally to many metal ions, especially those that are Lewis acidic and hydrolysis prone. This group includes established biometals like iron, which despite decades of study still occurs in coordination environments not yet recognized.46 By understanding both how titanium is known to interact with organisms and how it interacts with local protein environments, it may be possible to address the essentiality of this quite abundant element.

Acknowledgements

This work was supported by the U.S. National Science Foundation (CHE-1412373) and by the U.S. National Science Foundation award #0841377 for a graduate traineeship for MRZ.

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