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Synthesis of new piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives as inhibitors of Candida albicans multidrug transporters by a Buchwald–Hartwig cross-coupling reaction

Jean Guillon a, Shweta Nimb, Stéphane Moreaua, Luisa Rongaa, Solène Savrimoutoua, Elisabeth Thiveta, Mathieu Marchiviec, Attilio Di Pietrod, Rajendra Prasade and Marc Le Borgne*f
aUniv. Bordeaux, INSERM U1212 – UMR CNRS 5320, ARNA Laboratory, UFR des Sciences Pharmaceutiques, F-33076 Bordeaux Cedex, France
bSchool of Life Sciences, Jawaharlal Nehru University, 110067 New Delhi, India
cCNRS, Univ. Bordeaux, Bordeaux INP, ICMCB, UMR 5026, F-33608 Pessac Cedex, France
dDRMP Group, IBCP, UMR 5086 (MMSB), CNRS/Lyon I University, 69367 Lyon, France
eAmity Institute of Integrative Sciences and Health, Amity University, Education Valley, Gurgaon 122413, India
fUniversité de Lyon, Université Claude Bernard Lyon 1, Faculté de Pharmacie – ISPB, EA 4446 Bioactive Molecules and Medicinal Chemistry, SFR Santé Lyon-Est CNRS UMS3453 – INSERM US7, Lyon, France. E-mail: marc.le-borgne@univ-lyon1.fr

Received 10th November 2019 , Accepted 30th December 2019

First published on 15th January 2020


Abstract

Two series of piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives were prepared via a Buchwald–Hartwig cross-coupling reaction and then evaluated for their ability to inhibit the drug efflux activity of CaCdr1p and CaMdr1p transporters of Candida albicans overexpressed in a Saccharomyces cerevisiae strain. In the initial screening of twenty-nine piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives, twenty-three compounds behaved as dual inhibitors of CaCdr1p and CaMdr1p. Only four compounds showed exclusive inhibition of CaCdr1p or CaMdr1p. Further biological investigations were developed and for example, their antifungal potential was evaluated by measuring the growth of control yeast cells (AD1-8u) and efflux pump-overexpressing cells (AD-CDR1 and AD-MDR1) after exposition to variable concentrations of the tested compounds. The MIC80 values of nineteen compounds ranging from 100 to 901 μM for AD-CDR1 demonstrated that relative resistance index (RI) values were between 8 and 274. In comparison, only seven compounds had RI values superior to 4 in cells overexpressing Mdr1p. These results indicated substrate behavior for nineteen compounds for CaCdr1p and seven compounds for CaMdr1p, as these compounds were transported via MDR transporter overexpressing cells and not by the AD1-8u cells. Finally, in a combination assay with fluconazole, two compounds (1d and 1f) have shown a synergistic effect (fractional inhibitory concentration index (FICI) values ≤ 0.5) at micromolar concentrations in the AD-MDR1 yeast strain overexpressing CaMdr1p-protein, indicating an excellent potency toward chemosensitization.


Introduction

Transplantation surgery, cancer chemotherapy, and HIV infections have led to a worldwide rise of the immunocompromised population, and hence also of bacterial and fungal opportunistic infections.1 The fungal genera most often associated with invasive fungal infections include Candida, Aspergillus, and Cryptococcus,2 with opportunistic strains of Candida albicans accounting for approximately 50–60% causes of candidiasis, particularly in immunocompromised patients. The treatment of these Candida infections relies heavily on azole antifungal agents,3 for which widespread and prolonged use has led to the rapid emergence of multidrug resistant (MDR) isolates of C. albicans as well as of non-albicans species.4 Various mechanisms potentially contributing to the development of MDR have been identified, and the induction of genes encoding drug-efflux pumps, like the primary ATP binding cassette (ABC) transporter genes CaCDR1 and CaCDR2 and the secondary major-facilitator superfamily (MFS) transporter gene CaMDR1, has been shown to play a prominent role in the development of resistance to antifungal drugs.5–7 Overexpression of these pump proteins may lead to an increased efflux of drug substrates in MDR clinical isolates.4,8,9

The potent modulators of multidrug transporter CaCdr1p such as the immunosuppressants cyclosporin, FK520 and FK506, the natural polyphenol curcumin, the quorum-sensing molecule farnesol, the antabuse drug disulfiram, the antibiotic milbemycin, some synthetic-D-octapeptides, the anti-inflammatory drug ibuprofen and the antibacterial unnarmicins have been displayed to prevent drug extrusion and restore fungicidal synergism with the azoles and other drugs.10–14 Unlike CaCdr1p, there is only a handful number of chemosensitizers in case of CaMdr1p such as verapamil and enniantin B.15,16 Recently, a further screening from a library of synthetic aromatic compounds sharing a cyclobutene-dione moiety was investigated for the discovery of new inhibitors of MFS and ABC transporters of C. albicans. A few specific inhibitors of MFS transporter CaMdr1p were then identified.17 Therefore, the search for novel inhibitors able to block the drug extrusion mediated by these efflux proteins represents an attractive approach to reverse MDR.

The pyrrolo[1,2-a]quinoxaline heterocyclic framework constitutes the basis of an important class of compounds possessing interesting biological activities. These compounds have been reported as key intermediates for the assembly of several heterocycles including antipsychotic agent,18 anti-HIV agent,19 adenosine A3 receptor modulator,20 antiparasitic agents,21–25 and antitumor agents.26–31 We also previously demonstrated that the pyrrolo[1,2-a]quinoxaline heterocyclic scaffold could lead to the preparation of bacterial multidrug resistance pump inhibitors.32,33

In this context and as part of a programme on the development of new efflux pump inhibitors (EPIs), we decided to broaden the structural diversity and used the pyrrolo[1,2-a]quinoxaline moiety as a template for the design of new derivatives 1 and 2 in which a piperazine is incorporated in position 1, 4 or 9 of the heterocyclic core in analogy with the EPI pyrimidine and quinoline derivatives I–III, quinine and MS-209 used in the various multidrug resistance therapies (Fig. 1).34–38


image file: c9ra09348f-f1.tif
Fig. 1 Structures of previously described EPIs I–III, quinine and MS-209, and new synthesized substituted pyrrolo[1,2-a]quinoxaline derivatives 1–2.

Results and discussion

Chemistry

The reported piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives 1a–i were synthesized in five steps from 2-nitroaniline (Scheme 1). Preparation of 1-(2-nitrophenyl)pyrrole 2 was performed according to the Clauson–Kaas reaction run under micro-wave irradiation starting from 2-nitroaniline and 2,5-dimethoxytetrahydrofuran in acetic acid. This pathway partially involved synthetic methodologies already described by our group.21–24,28 The resulting 1-(2-nitrophenyl)pyrrole intermediate 2 was subsequently reduced into the attempted 1-(2-aminophenyl)pyrrole 3 using a sodium borohydride-copper(II) sulfate treatment in ethanol at room temperature. This NaBH4–CuSO4 system was found to be quite powerful in reducing our aromatic nitro group with excellent yield (85%). The reaction of 3 with triphosgene in toluene gave the lactam 4, which was subsequently chlorodehydroxylated with phosphorous oxychloride, leading to the 4-chloropyrrolo[1,2-a]quinoxaline 5a. The 4-phenylpyrrolo[1,2-a]quinoxaline 6 was easily prepared by a direct Suzuki–Miyaura cross-coupling reaction of 4-chloropyrroloquinoxalines 5a with potassium phenyltrifluoroborate performed in the presence of PdCl2(dppf)·CH2Cl2 as a catalyst, cesium carbonate as the base, and THF–H2O as the solvent system.23 Reaction of 6 and one equivalent of N-bromosuccinimide (NBS) afforded the 1-bromo-4-phenylpyrrolo[1,2-a]quinoxaline 7 as the sole reaction product.28 The Buchwald–Hartwig Pd-catalyzed amination of the 1-bromo-4-phenylpyrrolo[1,2-a]quinoxaline 7 using Pd2(dba)3 as catalyst with BINAP as the ligand was then investigated. Under these conditions, various substituted piperazines were successfully coupled with 7 to give the desired piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives 1a–i by using t-BuONa as a base and toluene as the solvent at 100 °C.39–41
image file: c9ra09348f-s1.tif
Scheme 1 Synthesis of 1-(4-substituted-piperazinyl)-4-phenylpyrrolo[1,2-a]quinoxalines 1a–i; reagents and conditions: (i) 2,5-diMeOTHF, AcOH, Δ; (ii) CuSO4/NaBH4, EtOH, RT; (iii) (Cl3CO)2CO, toluene, Δ; (iv) POCl3, Δ; (v) (OHC–C6H4)–BF3K, PdCl2(dppf)·CH2Cl2, Cs2CO3, THF–H2O, Δ; (vi) NBS, CH2Cl2, RT; (vii) R-piperazine, Pd2(dba)3, BINAP, t-BuONa, toluene, 100 °C.

The 3D structural determinations of 1a and 1h were established by X-ray crystallography (Fig. 2 and 3), and confirmed the structures in the solid state as anticipated on the basis of NMR data.


image file: c9ra09348f-f2.tif
Fig. 2 The ORTEP drawing of pyrrolo[1,2-a]quinoxaline 1a with thermal ellipsoids at 30% level.

image file: c9ra09348f-f3.tif
Fig. 3 The ORTEP drawing of pyrrolo[1,2-a]quinoxaline 1h (molecules A and B) with thermal ellipsoids at 30% level.

By using the same cross-coupling catalyzed methodology, the Pd-catalyzed coupling of substituted piperazines with the 4-chloropyrrolo[1,2-a]quinoxalines 5a–e30 led to the new 4-(4-substituted-piperazinyl)-4-phenylpyrrolo[1,2-a]quinoxaline 1j–w (Scheme 2). These compounds 1a–w were then converted into their hydrochloride or oxalate salts (Table 1).


image file: c9ra09348f-s2.tif
Scheme 2 Synthesis of 4-(4-substituted-piperazinyl)-4-phenylpyrrolo[1,2-a]quinoxalines 1j–w; reagents and conditions: (i) R-piperazine, Pd2(dba)3, BINAP, t-BuONa, toluene, 100 °C.
Table 1 Physical properties of the final amines 1a–w
Compound a,b,cSalt dmp (°C) eYield (%)
a The amines 1a, b were dissolved in 20 mL of anhydrous diethyl ether, and treated with HCl gas. After crystallization, the ammonium chlorides were collected by filtration and were washed with Et2O, then dried under reduced pressure.b The amines 1c–w were dissolved in 30 mL of 2-propanol, heated to boiling, and treated with oxalic acid (4 or 5 equiv., based on the amount of the starting material). The oxalate salts crystallized upon cooling were collected by filtration, and were washed with 2-propanol and Et2O.c The stoichiometry and composition of the salts were determined by elemental analyses (within ± 0.4% of the theoretical values).d Crystallization solvent: 2-PrOH–H2O.e The yields only included the conversions into the ammonium chlorides or oxalates.
1a 3HCl 114 71
1b 3HCl 88 68
1c (COOH)2, H2O 172 58
1d (COOH)2, H2O 109 61
1e (COOH)2, H2O 175 52
1f (COOH)2, H2O 156 59
1g (COOH)2, H2O 241 53
1h (COOH)2, H2O 238 64
1i (COOH)2, H2O 93 59
1j 2(COOH)2 203 66
1k 2(COOH)2 144 61
1l 2(COOH)2 189 72
1m 2(COOH)2 236 74
1n 2(COOH)2 228 67
1n 2(COOH)2 215 82
1o 2(COOH)2 194 59
1p 2(COOH)2 190 63
1q 2(COOH)2 189 67
1r 2(COOH)2 212 64
1s 2(COOH)2 225 71
1t 2(COOH)2 190 60
1u 2(COOH)2 180 75
1v 2(COOH)2 251 62
1w 2(COOH)2 253 60


The series of piperazinylalcohol pyrrolo[1,2-a]quinoxaline derivatives 2a–f was synthesized as previously described by the authors starting from 5a or 8 (Schemes 3 and 4).42


image file: c9ra09348f-s3.tif
Scheme 3 Synthesis of piperazinylalcohol-pyrrolo[1,2-a]quinoxalines 2a–e; reagents and conditions: (i) K2CO3, DMF, 120 °C.

image file: c9ra09348f-s4.tif
Scheme 4 Synthesis of piperazinylalcohol-pyrrolo[1,2-a]quinoxaline 2f; reagents and conditions: (i) (C6H5)2CH-piperazine, isopropanol, Δ.

Biological assays

Piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives were evaluated for their ability to inhibit the drug-efflux activity of CaCdr1p and CaMdr1p transporters of C. albicans overexpressed in a Saccharomyces cerevisiae strain. The transport assay was performed by monitoring Nile Red (NR) efflux in cells overexpressing the referred efflux pumps. In this assay, compounds were compared to wild-type control cells, and when the Nile Red efflux was lower than 60%, the compound was indeed considered to have inhibitory activity (Fig. 4). The efflux study performed on twenty-nine compounds revealed the total of twenty-three compounds (1a, 1b, 1e, 1g, 1h, 1i, 1j, 1k, 1l, 1m, 1n, 1o, 1p, 1s, 1t, 1u, 1v, 1w, 2a, 2c, 2d, 2e, 2f) that behaved as dual inhibitors of CaCdr1p and CaMdr1p. Compounds 2c > 2d > 1j = 1l = 1o = 1v revealed the strongest inhibitory activity of Cdr1p efflux pump, ranging from 77 to 82%. Regarding S. cerevisiae cells overexpressing Mdr1p, the most active compounds were 2f > 2c > 1a = 1b = 1j = 1k = 1n = 1s = 1t = 2a = 2d > 1l > 1o ranging from 78 to 84% efflux inhibition. This initial screening identified compounds 1u, 1w and 2e as dual inhibitors with intermediate potency. Compounds 1e, 1g, 1h, 1i, 1m, 1p finally revealed a weak inhibitory activity in both cell lines overexpressing the two types of efflux pumps. Compound 1c and 1f showed exclusive but weak inhibition of CaCdr1p, whereas compounds 1d and 1q demonstrated their exclusive impact on CaMdr1p with efflux inhibition ranged from 29 to 50%. Compounds 1r and 2b are not active on both efflux pumps.
image file: c9ra09348f-f4.tif
Fig. 4 Effects of piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives 1a–w and 2a–f on Nile Red (NR) efflux in S. cerevisiae cells overexpressing (A) the CaCdr1p ABC-transporter (AD-CDR1) and (B) the CaMdr1p MFS-transporter (AD-MDR1). Inhibition of rhodamine 6G (R6G) efflux in the presence of curcumin (70 μM) (CUR) was taken as positive control for CaCdr1p. Inhibition of [3H] fluconazole ([3H] Flu) efflux in the presence of verapamil (90 μM) was taken as a positive control for CaMdr1p. Values are the means ± standard deviations (error bars) for three independent experiments. Nile Red was used as the transport substrate at 7 μM, and its efflux was measured by fluorescence. Each inhibitor was used individually at a 10-fold excess over substrate (70 μM). The first column of each graph shows the Nile Red efflux in absence of any inhibitor.

The antifungal potential of all piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives was also evaluated by measuring the growth of control yeast cells (AD1-8u) and efflux pump-overexpressing cells (AD-CDR1 and AD-MDR1) when exposed to variable concentrations of the tested compounds for 48 h. The yeast growth in the absence of inhibitor was considered as 100%. The results were expressed as MIC80, the concentration needed to decrease 80% of cells growth (ESI Table S1). In case of the control yeast cells (AD1-8u), compounds did not reveal any significant antifungal activity, as demonstrated by their relative resistance index (RI) values close to 1. However the MIC80 values of nineteen selected compounds (Table 2) ranging from 100 to 901 μM for AD-CDR1 demonstrated that RI values were comprised between 8 and 274. In comparison, only seven compounds (1c, 1e, 1g, 1j, 1k, 1m, 1o) had RI values superior to 4 in cells overexpressing Mdr1p. These results indicate the substrate behavior for both 19 compounds for CaCdr1p and seven compounds for CaMdr1p, as these compounds are transported via MDR transporter overexpressing cells and not by the AD1-8u cells. Interestingly, all the nineteen compounds were observed to inhibit the Nile Red transport from the AD-CDR1 cells and simultaneously behaved as substrate of CaCdr1p (Table 2). Then it could be suggested that the Nile Red and these compounds seem to share the same drug binding pocket of CDR1, undergoing the kinetics of competitive inhibition. By contrast, in the case of AD-MDR1 cells, the route of efflux transport for Nile Red and these compounds did not overlap as only seven compounds showed substrate behavior. Here the results suggest the presence of an allosteric drug binding pocket for MDR1 and thus following the path of non-competitive kinetics.

Table 2 Effects of compounds 1 and 2 on Nile Red (NR) efflux by CaCdr1p and CaMdr1p in S. cerevisiae cells either overexpressing the Cdr1p ABC-transporter (AD-CDR1) or the Mdr1p MFS-transporter (AD-MDR1)
Compounds Yeast strains aMIC80 (μM) bRI
a The MIC80 values of cytotoxicity were determined by measuring the optical density of cultures of each strain in the absence and the presence of a range of concentrations of the different compounds. Yeast growth in the absence of inhibitor was considered as 100%, and the concentration where the growth was decreased to 80% was taken as MIC80. The values are the means ± standard deviations of three independent experiments.b The resistance index (RI) was calculated as the ratio between the MIC80 value determined for the strain overexpressing the transporter relatively to that of the control strain (AD1-8u).
1c AD1-8u 99 ± 10 1
CDR1 817 ± 87 8.25
MDR1 400 ± 55 4.04
1e AD1-8u 12 ± 1.3 1
CDR1 810 ± 86 67.5
MDR1 789 ± 85 65.75
1g AD1-8u 50 ± 6 1
CDR1 803 ± 83 16
MDR1 221 ± 31 4.2
1j AD1-8u 3 ± 0.4 1
CDR1 100 ± 12 33.3
MDR1 25 ± 3 8.33
1k AD1-8u 3 ± 0.2 1
CDR1 400 ± 49 133.3
MDR1 12 ± 1 4
1l AD1-8u 6 ± 0.5 1
CDR1 803 ± 102 133.8
MDR1 12 ± 2 2
1m AD1-8u 12 ± 1.6 1
CDR1 408 ± 52 34
MDR1 53 ± 6.2 4.41
1n AD1-8u 25 ± 3.1 1
CDR1 400 ± 53 16
MDR1 50 ± 6.2 2
1o AD1-8u 6 ± 0.71 1
CDR1 200 ± 31 33.3
MDR1 25 ± 3.4 4.1
1r AD1-8u 6 ± 0.5 1
CDR1 776 ± 81 129.3
MDR1 12 ± 1.7 2
1s AD1-8u 28 ± 1.7 1
CDR1 387 ± 47 13.8
MDR1 59 ± 4.7 2.1
1t AD1-8u 94 ± 7.3 1
CDR1 821 ± 75 8.7
MDR1 102 ± 9.3 1.08
1w AD1-8u 104 ± 8.4 1
CDR1 901 ± 77 8.6
MDR1 187 ± 16 1.7
2a AD1-8u 47 ± 2.9 1
CDR1 412 ± 27 8
MDR1 91 ± 7.9 1.9
2b AD1-8u 94 ± 110 1
CDR1 811 ± 119 8.6
MDR1 104 ± 121 1.1
2c AD1-8u 3 ± 0.1 1
CDR1 817 ± 77 272.3
MDR1 6 ± 0.2 2
2d AD1-8u 6 ± 0.2 1
CDR1 831 ± 88 138.5
MDR1 5 ± 0.2 0.83
2e AD1-8u 3 ± 0.1 1
CDR1 821 ± 86 273.6
MDR1 6 ± 0.2 2
2f AD1-8u 6 ± 0.1 1
CDR1 804 ± 71 134
MDR1 14 ± 1.2 2.33


The ability of the compounds to sensitize yeast growth to the antifungal agent fluconazole was evaluated by the checkerboard method.43 In this assay, the control (AD1-8u) cells and the CaCdr1p- and CaMdr1p-overexpressing cells were grown in the presence of either fluconazole alone or a combination therapy (efflux pump inhibitor plus fluconazole). The results, expressed as the fractional inhibitory concentration index (FICI), are summarized in ESI Table S2. FICI values ≤ 0.5 indicate synergistic interaction between the inhibitor and the substrate.44 It was observed that the two piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives 1d and 1f with FIC = 0.0076 and 0.25, respectively, displayed strong synergistic effects (FICI = 0.15 and 0.4, respectively) when both are combined with fluconazole (FIC = 0.15) in the AD-MDR1 yeast strain overexpressing the MFS CaMdr1p, decreasing 129-fold the MIC80 of the antifungal agent. High FICI values (≥1) were found for the remaining compounds (ESI Table S2). Similarly, high FICI values were also found in the AD-CDR1.

The effect of the compounds 1d and 1f was examined by confocal imaging of GFP-tagged Cdr1p and Mdr1p, and revealed the non-effect of these compounds on the intactness of the overexpressing strains AD-CDR1 and AD-MDR1 (Fig. 5).


image file: c9ra09348f-f5.tif
Fig. 5 Effect of compounds 1d and 1f on the expression of the GFP-tagged Cdr1p and Mdr1p. Panels (A) AD-CDR1 and (B) AD-MDR1 were evaluated in the presence or in the absence of compounds 1d and 1f.

Finally, compounds 1d and 1f were further evaluated for their ability to chemosensitize the azole-resistant clinical isolate (F5) of C. albicans together with the azole-susceptible strain (F2).45,46 As can be observed in Table 3, when combined with fluconazole, compounds 1d and 1f (FICI = 0.6 and 0.78, respectively) were able to reduce the effective concentration of fluconazole.

Table 3 Ability of compounds 1d and 1f to sensitize yeast growth to fluconazole cytotoxicity
Strain Compound aFIC of fluconazole bFIC of compound cFICI
a Evaluated by the checkerboard method, and expressed as the fractional inhibitory concentration (FIC) values for the fluconazole (=MIC80 of fluconazole in combination/MIC80 of fluconazole alone).b Each compound (=MIC80 of compound in combination/MIC80 of compound alone). The values in brackets are expressed in μM.c FIC index (FICI) value ≤0.5 indicates synergistic interaction between the compound and the fluconazole.
AD1-8u 1d 1 (1.5/1.5) 1 (781/781) 2 (1 + 1)
1f 1 (1.5/1.5) 1 (811/811) 2 (1 + 1)
AD1-CDR1 1d 0.3 (81/209) 1 (791/791) 1.3 (0.3 + 1)
1f 0.1 (40/209) 1 (791/791) 1.1 (0.1 + 1)
AD1-MDR1 1d 0.15 (10/65) 0.0076 (6.25/812) 0.15 (0.15 + 0.0076)
1f 0.15 (10/65) 0.25 (200/799) 0.4 (0.15 + 0.25)
F2 1d 1 (13/13) 1 (618/618) 2 (1 + 1)
1f 0.5 (7.5/13) 1 (400/400) 1.5 (0.5 + 1)
F5 1d 0.4 (200/418) 0.2 (150/720) 0.6 (0.2 + 0.4)
1f 0.35 (150/418) 0.43 (350/799) 0.78 (0.35 + 0.43)


About the structure–activity relationships on both series of piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives, the three best dual inhibitors belonging to the series 2 (2c, 2d, 2f) has a common structural feature, namely the presence of a spacer (oxy-propan-2-ol or amino-propan-2-ol) between the tricyclic scaffold and the piperazinyl moiety. On the other hand, exclusive inhibitors of CaCdr1p (1c, 1f) or CaMdr1p (1d, 1q) have the piperazinyl moiety directly linked to the pyrroloquinoxaline. Four of these compounds (2c, 2f, 1d and 2d) have a benzhydryl substituent or related on the piperazine ring. Further pharmacomodulation works will be carried out to extend and deepen our knowledge.

Conclusions

The chemical approach by Buchwald–Hartwig Pd-catalyzed amination of the 1-bromo-4-phenylpyrrolo[1,2-a]quinoxaline 7 or the 4-chloropyrrolo[1,2-a]quinoxalines 5a–e was successfully used to access to new piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives 1a–w. In parallel, six other derivatives containing as well a quinoxaline moiety (compounds 2a–f, previously synthetized42) were added to this study. Then twenty-nine compounds have been selected on their potential to inhibit fungal multidrug resistance pumps as pyrrolo[1,2-a]quinoxaline template was already used and efficient for the inhibition of bacterial efflux pumps.32,33

Currently, we broadened our horizon to look into the role of these compounds to inhibit the CaCdr1p and CaMdr1p transporters in pathogenic yeast C. albicans. Our study based on the biological assays corroborated with the piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives to be the putative and promising modulators of efflux pumps in the pathogenic yeast C. albicans. The results of this work have demonstrated that most of the compounds could inhibit the efflux of Nile Red mediated by both the ABC transporter CaCdr1p and the MFS pump CaMdr1p. Some compounds were able to inhibit specifically the efflux of Nile Red without being themselves substrates of the efflux-pump proteins CaMdr1p and CaMdr1p. This assumption was corroborated by the relative resistance index values close to 1 obtained from the cytotoxicity assays, showing that the presence of efflux-pump proteins did not affect the growth and the viability of yeast cells.

In S. cerevisiae cells expressing CaCdr1p and CaMdr1p, the greater inhibitory effect on Nile Red efflux was obtained with compounds 2c–f (5 < MIC80 (μM) < 14) on CaMdr1p. For compounds 2c–e, the best three compounds (MIC80 = 5–6 μM), the main structural feature is the presence of a bulky group R (e.g. compound 2c with a diphenylmethyl moiety).

In the combination assay with fluconazole, the two compounds 1d and 1f have shown a synergistic effect (FICI values ≤ 0.5) at micromolar concentrations in the AD-MDR1 yeast strain overexpressing CaMdr1p-protein, indicating an excellent potency toward chemosensitization. Interestingly, compound 1d showed exclusive and maximum Nile Red efflux inhibition on AD-MDR1 strain and showed excellent chemosensitization in the presence of fluconazole, whereas this was not observed with compound 1f. In this context, it is important to mention that each drug/compound may interact differently with different amino acid residues within the binding pocket of CaMdr1p, which could explain the different behavior of Nile Red and fluconazole with these compounds. As no synergy has been found in the clinical isolate F5 overexpressing CaMdr1p, a significant decreasing of the effective concentration of the antifungal agent was also observed, corroborating the results obtained in the AD-MDR1 strain. It is also interesting to note that compound 1d is the unique active compound bearing a benzhydryl moiety in the sub-series 1.

Finally, this study has shown that piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives are able to reverse antifungal resistance, mediated by efflux pumps belonging to both ABC and MFS superfamilies of transporters of the pathogenic yeast C. albicans. Therefore, at non-inhibitory concentrations, these compounds stand as wise candidates chosen to be potential modulators in MDR reversal. For example, compound 1d could offer a new treatment strategy known as combo-therapy in the use of new azole antifungals recently designed.47,48 Nevertheless further chemical modifications will be carried out to synthetize a second generation of piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives designed specifically as EPIs of the pathogenic yeast C. albicans. Once again, compound 1d will be investigated for assessing the structural importance of its benzhydryl moiety (e.g. nature and position of additional substituents). By similarity, a pharmacomodulation study around compound 2c will be also managed, using rational drug design tools such as 3D structural characteristics of efflux pumps49 and recent chemical features50 to design new piperazinyl-pyrrolo[1,2-a]quinoxaline derivatives as specific EPIs of C. albicans.

Experimental section

Chemistry

General information. Commercially reagents were used as received without additional purification. Melting points were determined with an SM-LUX-POL Leitz hot-stage microscope and are uncorrected. NMR spectra were recorded with tetramethylsilane as an internal standard using a Bruker Avance 300 spectrometer. Splitting patterns have been designated as follows: s = singlet; bs = broad singlet; d = doublet; t = triplet; q = quartet; dd = double doublet; ddd = double double doublet; dt = double triplet; m = multiplet. For all compounds 1a–w, all NMR spectra are available in the ESI (Fig. S1–S45). Analytical TLC were carried out on 0.25 precoated silica gel plates (POLYGRAM SIL G/UV254) and visualization of compounds after UV light irradiation. Silica gel 60 (70–230 mesh) was used for column chromatography. Elemental analyses were found within ±0.4% of the theoretical values.
General procedure: synthesis of 1-piperazinyl-4-phenylpyrrolo[1,2-a]quinoxalines 1a–w. To a solution of 2.5 mmol of 1-bromo-4-phenylpyrrolo[1,2-a]quinoxaline 7 or 4-chloropyrrolo[1,2-a]quinoxaline 5a–e in 18 mL of anhydrous toluene were added 3 mmol (1.2 equiv.) of substituted piperazine, 0.333 g (3.5 mmol, 1.4 equiv.) of t-BuONa, 0.046 g (0.05 mmol, 0.02 equiv.) of tris(dibenzylideneacetone)dipalladium (0) [Pd2(dba)3] and 0.062 g (0.1 mmol, 0.04 equiv.) of 2,2′-bis(diphenylphosphino)-1,1′-binaphthalene [(±)-BINAP]. The reaction mixture was then heated at 100 °C during 15 h. After cooling, the mixture was diluted with methylene chloride. The reaction mixture was then filtered on Celite and then diluted with water. The organic layer was separated and the aqueous layer was extracted with methylene chloride (20 mL). The organic layers were collected, dried over magnesium sulfate, filtered and evaporated to dryness. Column chromatography of the residue on silica gel using ethyl acetate–methanol (8/2) as eluent gave the final product 1.
1-(4-Phenylpiperazinyl)-4-phenylpyrrolo[1,2-a]quinoxaline (1a). Yellow crystals (48%) mp 203 °C. 1H NMR (CDCl3) δ 9.21 (dd, 1H, J = 8.10 and 2.80 Hz, H-9), 8.02 (dd, 1H, J = 8.10 and 2.80 Hz, H-6), 7.96–7.93 (m, 2H, H-2′ and H-6′), 7.57–7.52 (m, 3H, H-3′, H-4′ and H-5′), 7.47–7.43 (m, 2H, H-7 and H-8), 7.35 (t, 2H, J = 7.70 Hz, H-3′′ and H-5′′), 7.07 (d, 2H, J = 7.70 Hz, H-2′′ and H-6′′), 6.96 (t, 1H, J = 7.70 Hz, H-4′′), 6.92 (d, 1H, J = 4.30 Hz, H-2), 6.59 (d, 1H, J = 4.30 Hz, H-3), 3.78–3.74 (m, 2H, CH2-pip), 3.51–3.47 (m, 2H, CH2-pip), 3.31–3.26 (m, 2H, CH2-pip), 3.18–3.09 (m, 2H, CH2-pip). 13C NMR (CDCl3) δ 156.1 (C-4), 152.6 (C-1′′), 145.1 (C-3a), 139.4 (C-5a), 138.4 (C-1′), 131.2 (C-7), 130.7 (C-8, C-3′′ and C-5′′), 130.2 (C-3′ and C-5′), 130.1 (C-9a), 130.0 (C-2′ and C-6′), 127.7 (C-9), 126.5 (C-6), 123.5 (C-1), 121.8 (C-4′), 117.9 (C-4′′), 117.8 (C-2′′ and C-6′′), 109.9 (C-2), 104.7 (C-3), 53.8 (CH2-pip), 50.6 (CH2-pip). Anal. calcd for C27H24N4: C, 80.17; H, 5.98; N, 13.85. Found: C, 81.04; H, 6.02; N, 13.94.
1-[4-(2-Methoxyphenyl)piperazinyl]-4-phenylpyrrolo[1,2-a]quinoxaline (1b). Yellow crystals (21%) mp 38 °C. 1H NMR (CDCl3) δ 9.23 (dd, 1H, J = 7.85 and 2.40 Hz, H-9), 8.01 (dd, 1H, J = 7.85 and 2.40 Hz, H-6), 7.96–7.94 (m, 2H, H-2′ and H-6′), 7.56–7.53 (m, 3H, H-3′, H-4′ and H-5′), 7.52–7.42 (m, 2H, H-7 and H-8), 7.13–7.06 (m, 2H, H-4′′ and H-5′′), 7.05–7.01 (m, 1H, H-6′′), 6.96 (dd, 1H, J = 8.50 and 2.15 Hz, H-3′′), 6.92 (d, 1H, J = 4.30 Hz, H-2), 6.61 (d, 1H, J = 4.30 Hz, H-3), 3.93 (s, 3H, CH3O), 3.65–3.61 (m, 2H, CH2-pip), 3.49–3.43 (m, 2H, CH2-pip), 3.31–3.12 (m, 4H, CH2-pip). 13C NMR (CDCl3) δ 156.2 (C-4), 153.7 (C-2′′), 145.2 (C-1′′), 142.4 (C-3a), 139.7 (C-5a), 138.7 (C-1′), 131.0 (C-7), 130.8 (C-8), 130.2 (C-9a), 130.1 (C-3′ and C-5′), 129.9 (C-2′ and C-6′), 127.5 (C-9), 126.3 (C-6), 124.8 (C-5′′), 123.5 (C-1), 122.4 (C-4′), 119.7 (C-4′′), 117.9 (C-6′′), 112.7 (C-3′′), 109.5 (C-2), 104.7 (C-3), 56.8 (CH3O), 54.0 (CH2-pip), 52.0 (CH2-pip). Anal. calcd for C28H26N4O: C, 77.39; H, 6.03; N, 12.89. Found: C, 77.41; H, 5.94; N, 13.04.
1-(4-Benzylpiperazinyl)-4-phenylpyrrolo[1,2-a]quinoxaline (1c). Yellow oil (41%). 1H NMR (CDCl3) δ 9.15 (dd, 1H, J = 8.00 and 1.70 Hz, H-9), 8.00 (dd, 1H, J = 8.00 and 1.70 Hz, H-6), 7.96–7.92 (m, 2H, H-2′ and H-6′), 7.54–7.51 (m, 3H, H-3′, H-4′ and H-5′), 7.48–7.45 (m, 2H, H-7 and H-8), 7.43–7.41 (m, 2H, H-2′′ and H-6′′), 7.41–7.28 (m, 3H, H-3′′, H-4′′ and H-5′′), 6.88 (d, 1H, J = 4.30 Hz, H-2), 6.54 (d, 1H, J = 4.30 Hz, H-3), 3.68 (sl, 2H, CH2), 3.33–3.29 (m, 2H, CH2-pip), 3.06–2.97 (m, 4H, CH2-pip), 2.60–2.55 (m, 2H, CH2-pip). 13C NMR (CDCl3) δ 156.2 (C-4), 145.2 (C-3a), 139.8 (C-5a), 139.3 (C-1′′), 138.8 (C-1′), 130.9 (C-7), 130.8 (C-8), 130.6 (C-3′ and C-5′), 130.2 (C-9a), 130.1 (C-2′′ and C-6′′), 129.9 (C-3′′ and C-5′′), 129.8 (C-2′ and C-6′), 128.7 (C-9), 127.5 (C-6), 126.2 (C-4′), 123.4 (C-1), 118.0 (C-4′′), 109.3 (C-2), 104.4 (C-3), 64.6 (NCH2), 54.4 (CH2-pip), 53.7 (CH2-pip). Anal. calcd for C28H26N4: C, 80.35; H, 6.26; N, 13.39. Found: C, 80.09; H, 6.34; N, 13.57.
1-[4-(Diphenylmethyl)piperazinyl]-4-phenylpyrrolo[1,2-a]quinoxaline (1d). Yellow crystals (68%) mp 69 °C. 1H NMR (CDCl3) δ 9.12 (dd, 1H, J = 7.40 and 2.20 Hz, H-9), 8.00–7.92 (m, 3H, H-6, H-2′ and H-6′), 7.55–7.52 (m, 7H, H-3′, H-4′, H-5′, H-2′′ and H-6′′), 7.45–7.41 (m, 2H, H-7 and H-8), 7.37–7.31 (m, 4H, H-3′′ and H-5′′), 7.28–7.21 (m, 2H, H-4′′), 6.90 (d, 1H, J = 4.30 Hz, H-2), 6.55 (d, 1H, J = 4.30 Hz, H-3), 4.41 (s, 1H, CH), 3.09–3.00 (m, 4H, CH2-pip), 2.48–2.41 (m, 2H, CH2-pip). 13C NMR (CDCl3) δ 156.1 (C-4), 145.3 (C-3a), 144.0 (2 C-1′′), 139.8 (C-5a), 138.7 (C-1′), 130.9 (C-7), 130.7 (C-8), 130.2 (C-9a), 130.1 (2 C-3′′, 2 C-5′′, C-3′ and C-5′), 129.9 (C-2′′ and C-6′′), 129.2 (C-2′ and C-6′), 128.7 (C-9), 127.5 (C-6), 126.2 (C-4′), 123.4 (C-1), 118.0 (2 C-4′′), 109.4 (C-2), 104.3 (C-3), 77.9 (NCH), 54.0 (CH2-pip), 53.3 (CH2-pip). Anal. calcd for C34H30N4: C, 82.56; H, 6.11; N, 11.33. Found: C, 83.27; H, 5.82; N, 10.91.
1-(4-Phenethylpiperazinyl)-4-phenylpyrrolo[1,2-a]quinoxaline (1e). Yellow oil (56%). 1H NMR (CDCl3) δ 9.15 (dd, 1H, J = 7.90 and 2.35 Hz, H-9), 7.99 (dd, 1H, J = 7.90 and 2.35 Hz, H-6), 7.96–7.92 (m, 2H, H-2′ and H-6′), 7.56–7.50 (m, 3H, H-3′, H-4′ and H-5′), 7.48–7.45 (m, 2H, H-7 and H-8), 7.37–7.32 (t, 2H, J = 7.20 Hz, H-2′′ and H6′′), 7.33–7.25 (m, 3H, H-3′′, H-4′′ and H-5′′), 6.89 (d, 1H, J = 4.30 Hz, H-2), 6.55 (d, 1H, J = 4.30 Hz, H-3), 3.38–3.34 (m, 2H, CH2-pip), 3.14–3.01 (m, 4H, CH2-pip), 2.95–2.90 (ddd, 2H, J = 12.20, 8.55 and 7.40 Hz, CH2), 2.82–2.76 (ddd, 2H, J = 12.20, 8.55 and 7.40 Hz, CH2), 2.65–2.58 (m, 2H, CH2-pip). 13C NMR (CDCl3) δ 156.1 (C-4), 145.2 (C-3a), 141.3 (C-5a), 139.8 (C-1′′), 138.8 (C-1′), 131.0 (C-7), 130.9 (C-8), 130.2 (C-3′ and C-5′), 130.1 (C-9a), 130.0 (C-2′′ and C-6′′), 129.9 (C-3′′, C-5′′, C-2′ and C-6′), 127.6 (C-9), 127.5 (C-6), 126.2 (C-4′), 123.5 (C-1), 117.9 (C-4′′), 109.4 (C-2), 104.5 (C-3), 61.8 (NCH2), 54.4 (CH2-pip), 53.6 (CH2-pip), 35.0 (CH2). Anal. calcd for C29H28N4: C, 80.52; H, 6.52; N, 12.95. Found: C, 79.96; H, 6.12; N, 12.92.
1-{4-[(2-Trifluoromethyl)phenethyl]piperazinyl}-4-phenylpyrrolo[1,2-a]quinoxaline (1f). Yellow crystals (63%); mp 34 °C. 1H NMR (CDCl3) δ 9.16 (dd, 1H, J = 8.20 and 2.00 Hz, H-9), 8.01 (dd, 1H, J = 8.20 and 2.00 Hz, H-6), 7.97–7.93 (m, 2H, H-2′ and H-6′), 7.68 (d, 1H, J = 7.80 Hz, H-3′′), 7.57–7.48 (m, 5H, H-4′, H-3′, H-5′, H-7 and H-8), 7.46–7.41 (m, 2H, H-4′′ and H-6′′), 7.35 (t, 1H, J = 7.60 Hz, H-5′′), 6.90 (d, 1H, J = 4.25 Hz, H-2), 6.55 (d, 1H, J = 4.25 Hz, H-3), 3.38–3.34 (m, 2H, CH2), 3.13–3.00 (m, 6H, CH2-pip and CH2), 2.81–2.76 (m, 2H, CH2-pip), 2.68–2.61 (m, 2H, CH2-pip). 13C NMR (CDCl3) δ 156.2 (C-4), 145.1 (C-3a), 140.1 (q, J = 1.6 Hz, C-1′′), 139.8 (C-1′), 138.8 (C-5a), 133.2 (C-5′′), 133.1 (C-6′′), 133.0 (C-4′′), 131.0 (C-7), 130.9 (C-8), 130.3 (q, J = 29.5 Hz, C-2′′), 130.2 (C-9a), 130.1 (C-3′ and C-5′), 129.9 (C-2′ and C-6′), 127.5 (C-9), 127.4 (q, J = 5.6 Hz, C-3′′), 126.2 (C-6), 126.0 (q, J = 272.2 Hz, CF3), 123.4 (C-1), 117.9 (C-4′), 109.3 (C-2), 104.4 (C-3), 61.6 (NCH2), 54.3 (CH2-pip), 53.7 (CH2-pip), 31.7 (CH2). Anal. calcd for C30H27F3N4: C, 71.98; H, 5.44; N, 11.19. Found: C, 72.23; H, 4.98; N, 11.02.
1-[4-(3-Fluorophenethyl)piperazinyl]-4-phenylpyrrolo[1,2-a]quinoxaline (1g). Yellow crystals (49%) mp 56 °C. 1H NMR (CDCl3) δ 9.15 (dd, 1H, J = 7.80 and 2.10 Hz, H-9), 8.01 (dd, 1H, J = 7.80 and 2.10 Hz, H-6), 7.96–7.93 (m, 2H, H-2′ and H-6′), 7.55–7.52 (m, 2H, H-3′ and H-5′), 7.48–7.43 (m, 2H, H-7 and H-8), 7.31–7.21 (m, 2H, H-5′′ and H-6′′), 7.08–6.88 (m, 2H, H-2′′ and H-4′′), 6.90 (d, 1H, J = 4.20 Hz, H-2), 6.56 (d, 1H, J = 4.20 Hz, H-3), 3.39–3.35 (m, 2H, CH2-pip), 3.14–3.07 (m, 4H, CH2-pip), 2.94–2.89 (m, 2H, CH2), 2.83–2.80 (m, 2H, CH2-), 2.64–2.61 (m, 2H, CH2-pip). Anal. calcd for C29H27FN4: C, 77.31; H, 6.04; N, 12.43. Found: C, 77.46; H, 6.15; N, 12.61.
1-[4-(4-Fluorophenethyl)piperazinyl]-4-phenylpyrrolo[1,2-a]quinoxaline (1h). Yellow crystals (55%) mp 150 °C. 1H NMR (CDCl3) δ 9.15 (dd, 1H, J = 7.70 and 2.10 Hz, H-9), 8.00 (dd, 1H, J = 7.70 and 2.10 Hz, H-6), 7.96–7.93 (m, 2H, H-2′ and H-6′), 7.55–7.51 (m, 2H, H-3′ and H-5′), 7.48–7.44 (m, 2H, H-7 and H-8), 7.30–7.21 (m, 3H, H-2′′, H-6′′ and H4′), 7.05 (t, 2H, J = 5.55 Hz, H-3′′ and H-5′′), 6.90 (d, 1H, J = 4.20 Hz, H-2), 6.56 (d, 1H, J = 4.20 Hz, H-3), 3.39–3.35 (m, 2H, CH2-pip), 3.12–3.07 (m, 4H, CH2-pip), 2.92–2.88 (m, 2H, CH2), 2.81–2.76 (m, 2H, CH2), 2.63–2.60 (m, 2H, CH2-pip). 13C NMR (CDCl3) δ 162.9 (d, J = 242.6 Hz, C-4′′), 156.2 (C-4), 144.8 (C-3a), 139.7 (C-5a), 138.8 (C-1′), 136.7 (d, J = 3.5 Hz, C-1′′), 131.5 (d, J = 7.8 Hz, C-2′′ and C-6′′), 131.0 (C-7), 130.9 (C-8), 130.1 (C-9a), 130.2 (C-3′ and C-5′), 130.0 (C-2′ and C-6′), 127.5 (C-9), 126.3 (C-6), 123.5 (C-1), 117.8 (C-4′), 116.7 (d, J = 20.9 Hz, C-3′′ and C-5′′), 109.4 (C-2), 104.5 (C-3), 61.7 (NCH2), 54.3 (CH2-pip), 53.4 (CH2-pip), 34.0 (CH2). Anal. calcd for C29H27FN4: C, 77.31; H, 6.04; N, 12.43. Found: C, 77.52; H, 6.17; N, 12.38.
1-[4-(3,4-Dichlorophenylethyl)piperazinyl]-4-phenylpyrrolo[1,2-a]quinoxaline (1i). Yellow oil (47%). 1H NMR (CDCl3) δ 9.13 (dd, 1H, J = 8.35 and 2.30 Hz, H-9), 8.00 (dd, 1H, J = 8.35 and 2.30 Hz, H-6), 7.96–7.93 (m, 2H, H-2′ and H-6′), 7.56–7.51 (m, 3H, H-2′ and H-6′), 7.56–7.51 (m, 3H, H-3′, H-4′ and H-5′), 7.49–7.43 (m, 2H, H-7 and H-8), 7.42–7.37 (m, 2H, H-3′′ and H-6′′), 7.10 (dd, 1H, J = 8.35 and 2.30 Hz, H-2′′), 6.89 (d, 1H, J = 4.30 Hz, H-2), 6.54 (d, 1H, J = 4.30 Hz, H-3), 3.37–3.33 (m, 2H, CH2), 3.08–2.98 (m, 2H, CH2-pip and CH2), 2.88–2.72 (m, 2H, CH2-pip), 2.64–2.56 (m, 2H, CH2-pip). 13C NMR (CDCl3) δ 156.2 (C-4), 144.9 (C-3a), 141.8 (C-5a), 139.8 (C-1′′), 138.8 (C-1′), 133.7 (C-3′′), 132.1 (C-5′′), 131.7 (C-7), 131.5 (C-4′′), 131.0 (C-8), 130.9 (C-2′′), 130.1 (C-9a), 130.0 (C-3′and C-5′), 129.9 (C-2′ and C-6′), 129.6 (C-6′′), 127.5 (C-9), 126.2 (C-6), 123.5 (C-1), 117.9 (C-4′), 109.3 (C-2), 104.4 (C-3), 61.2 (NCH2), 54.4 (CH2-pip), 53.7 (CH2-pip), 34.1 (CH2). Anal. calcd for C29H26Cl2N4: C, 69.46; H, 5.22; N, 11.17. Found: C, 69.41; H, 5.47; N, 10.95.
4-(4-Phenethylpiperazinyl)pyrrolo[1,2-a]quinoxaline (1j). Yellow oil (81%). 1H NMR (CDCl3) δ 7.84 (dd, 1H, J = 2.70 and 1.30 Hz, H-1), 7.76 (dd, 1H, J = 7.80 and 1.60 Hz, H-9), 7.72 (dd, 1H, J = 7.80 and 1.60 Hz, H-6), 7.37–7.25 (m, 7H, H-7, H-8, H-2′, H-3′, H-4′, H-5′ and H-6′), 6.83 (dd, 1H, J = 4.00 and 1.30 Hz, H-3), 6.78 (dd, 1H, J = 4.00 and 2.70 Hz, H-2), 3.92–3.88 (m, 4H, CH2-pip), 2.94–2.88 (m, 2H, CH2), 2.78–2.70 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 154.0 (C-4), 141.8 (C-1′), 137.6 (C-5a), 130.2 (C-3′ and C-5′), 129.9 (C-2′ and C-6′), 128.9 (C-7), 127.6 (C-9), 127.2 (C-3a), 126.6 (C-6), 125.4 (C-4′), 121.6 (C-9a), 115.8 (C-8), 114.7 (C-1), 113.9 (C-2), 108.3 (C-3), 62.0 (NCH2), 54.7 (CH2-pip), 49.5 (CH2-pip), 35.1 (CH2). Anal. calcd for C23H24N4: C, 77.49; H, 6.78; N, 15.72. Found: C, 77.61; H, 6.92; N, 15.94.
4-[4-(3,4-Dichlorophenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1k). Yellow oil (75%). 1H NMR (CDCl3) δ 7.82 (dd, 1H, J = 2.70 and 1.40 Hz, H-1), 7.74 (dd, 1H, J = 7.60 and 1.40 Hz, H-9), 7.70 (dd, 1H, J = 7.60 and 1.40 Hz, H-6), 7.38–7.25 (m, 4H, H-7, H-8, H-2′ and H-5′), 7.09 (dd, 1H, J = 8.10 and 1.80 Hz, H-6′), 6.80 (dd, 1H, J = 4.00 and 1.30 Hz, H-3), 6.77 (dd, 1H, J = 4.00 and 2.70 Hz, H-2), 3.87–3.83 (m, 4H, CH2-pip), 2.85–2.80 (m, 2H, CH2), 2.76–2.64 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 153.9 (C-4), 142.0 (C-1′), 137.5 (C-5a), 133.5 (C-3′), 132.0 (C-5′), 131.6 (C-2′), 131.4 (C-4′), 129.6 (C-6′), 128.9 (C-7), 127.2 (C-3a), 126.6 (C-9), 125.4 (C-6), 121.5 (C-9a), 115.8 (C-8), 114.7 (C-1), 113.9 (C-2), 108.2 (C-3), 61.2 (NCH2), 54.5 (CH2-pip), 49.3 (CH2-pip), 34.0 (CH2). Anal. calcd for C23H22Cl2N4: C, 64.94; H, 5.21; N, 13.17. Found: C, 65.08; H, 5.36; N, 13.35.
4-[4-(2-Trifluoromethylphenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1l). Yellow oil (79%). 1H NMR (CDCl3) δ 7.84 (dd, 1H, J = 2.70 and 1.30 Hz, H-1), 7.75 (dd, 1H, J = 7.80 and 1.40 Hz, H-9), 7.71 (dd, 1H, J = 7.80 and 1.40 Hz, H-6), 7.66 (d, 1H, J = 7.60 Hz, H-3′), 7.50 (t, 1H, J = 7.60 Hz, H-5′), 7.42 (d, 1H, J = 7.60 Hz, H-6′), 7.36–7.26 (m, 3H, H-7, H-8 and H-4′), 6.81 (dd, 1H, J = 4.00 and 1.30 Hz, H-3), 6.78 (dd, 1H, J = 4.00 and 2.70 Hz, H-2), 3.91–3.87 (m, 4H, CH2-pip), 3.11–3.06 (m, 2H, CH2), 2.81–2.70 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 153.9 (C-4), 140.2 (q, J = 1.6 Hz, C-1′), 137.6 (C-5a), 133.2 (q, J = 0.8 Hz, C-5′), 132.1 (C-6′), 130.0 (q, J = 29.4 Hz, C-2′), 128.9 (C-7), 127.6 (C-4′), 127.3 (q, J = 5.6 Hz, C-3′), 127.2 (C-3a), 126.5 (C-9), 126.1 (q, J = 272.1 Hz, CF3), 125.3 (C-6), 121.6 (C-9a), 115.8 (C-8), 114.7 (C-1), 113.9 (C-2), 108.2 (C-3), 61.6 (NCH2), 54.5 (CH2-pip), 49.4 (CH2-pip), 31.4 (CH2). Anal. calcd for C24H23F3N4: C, 67.91; H, 5.46; N, 13.20. Found: C, 68.05; H, 5.22; N, 13.38.
4-[4-(2-Fluorophenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1m). Yellow oil (74%). 1H NMR (CDCl3) δ 7.85–7.82 (m, 1H, H-1), 7.76 (dd, 1H, J = 7.80 and 1.40 Hz, H-9), 7.70 (dd, 1H, J = 7.80 and 1.40 Hz, H-6), 7.36–7.04 (m, 6H, H-7, H-8, H-3′, H-4′, H-5′ and H-6′), 6.81–6.77 (m, 2H, H-2 and H-3), 3.97–3.94 (m, 4H, CH2-pip), 3.01–2.98 (m, 2H, CH2), 2.87–2.83 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 162.6 (d, J = 243.3 Hz, C-2′), 153.9 (C-4), 137.6 (C-5a), 132.4 (d, J = 5 Hz, C-6′), 129.3 (d, J = 8 Hz, C-4′), 128.9 (C-7), 128.5 (d, J = 15.8 Hz, C-1′), 127.2 (C-3a), 126.5 (C-9), 125.4 (d, J = 3.2 Hz, C-5′), 125.3 (C-6), 121.6 (C-9a), 116.7 (d, J = 22.1 Hz, C-3′), 115.8 (C-8), 114.7 (C-1), 113.8 (C-2), 108.2 (C-3), 60.2 (NCH2), 54.5 (CH2-pip), 49.4 (CH2-pip), 28.2 (CH2). Anal. calcd for C23H23FN4: C, 73.77; H, 6.19; N, 14.96. Found: C, 73.85; H, 6.26; N, 15.12.
4-[4-(3-Fluorophenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1n). Yellow oil (81%). 1H NMR (CDCl3) δ 7.83 (dd, 1H, J = 2.70 and 1.30 Hz, H-1), 7.73 (dd, 1H, J = 8.00 and 1.50 Hz, H-9), 7.70 (dd, 1H, J = 8.00 and 1.50 Hz, H-6), 7.38–7.23 (m, 3H, H-7, H-8 and H-5′), 7.05–6.89 (m, 3H, H-2′, H-4′ and H-6′), 6.81 (dd, 1H, J = 3.90 and 1.30 Hz, H-3), 6.77 (dd, 1H, J = 3.90 and 2.70 Hz, H-2), 3.91–3.86 (m, 4H, CH2-pip), 2.93–2.87 (m, 2H, CH2), 2.78–2.69 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 164.3 (d, J = 244.1 Hz, C-3′), 153.7 (C-4), 143.5 (d, J = 7.35 Hz, C-1′), 137.3 (C-5a), 131.3 (d, J = 8.25 Hz, C-5′), 128.9 (C-7), 127.2 (C-3a), 126.6 (C-9), 125.8 (d, J = 2.80 Hz, C-6′), 125.6 (C-6), 121.4 (C-9a), 117.0 (d, J = 20.85 Hz, C-2′), 115.9 (C-8), 114.7 (C-1), 114.5 (d, J = 21.5 Hz, C-4′), 113.9 (C-2), 108.1 (C-3), 61.2 (NCH2), 54.3 (CH2-pip), 48.8 (CH2-pip), 34.1 (CH2). Anal. calcd for C23H23FN4: C, 73.77; H, 6.19; N, 14.96. Found: C, 73.71; H, 6.33; N, 15.16.
4-[4-(4-Fluorophenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1o). Yellow oil (85%). 1H NMR (CDCl3) δ 7.83 (dd, 1H, J = 2.70 and 1.20 Hz, H-1), 7.75 (dd, 1H, J = 8.00 and 1.50 Hz, H-9), 7.70 (dd, 1H, J = 8.00 and 1.50 Hz, H-6), 7.37–7.26 (m, 2H, H-7 and H-8), 7.21 (dd, 2H, J = 8.70 and 5.40 Hz, H-2′ and H-6′), 7.04–6.97 (m, 2H, H-3′ and H-5′), 6.81 (dd, 1H, J = 3.90 and 1.20 Hz, H-3), 6.77 (dd, 1H, J = 3.90 and 2.70 Hz, H-2), 3.91–3.86 (m, 4H, CH2-pip), 2.89–2.84 (m, 2H, CH2), 2.77–2.66 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 162.8 (d, J = 242.6 Hz, C-4′), 153.8 (C-4), 137.4 (C-5a), 137.0 (d, J = 3.2 Hz, C-1′), 131.5 (d, J = 7.7 Hz, C-2′ and C-6′), 128.9 (C-7), 127.2 (C-3a), 126.6 (C-9), 125.5 (C-6), 121.5 (C-9a), 116.6 (d, J = 21.2 Hz, C-3′ and C-5′), 115.8 (C-8), 114.7 (C-1), 113.9 (C-2), 108.1 (C-3), 61.8 (NCH2), 54.5 (CH2-pip), 49.1 (CH2-pip), 33.9 (CH2). Anal. calcd for C23H23FN4: C, 73.77; H, 6.19; N, 14.96. Found: C, 73.94; H, 6.05; N, 15.09.
4-[4-(3-Chlorophenyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1p). Pale-yellow oil (73%). 1H NMR (CDCl3) δ 7.90–7.88 (m, 1H, H-1), 7.82–7.76 (m, 2H, H-9 and H-6), 7.43–7.28 (m, 2H, H-7 and H-8), 7.26 (t, 1H, J = 8.10 Hz, H-5′), 7.00 (dd, 1H, J = 1.50 and 1.50 Hz, H-2′), 6.93–6.83 (m, 4H, H-4′, H-6′, H-2 and H-3), 4.01–3.97 (m, 4H, CH2-pip), 3.47–3.43 (m, 4H, CH2-pip). 13C NMR (CDCl3) δ 153.9 (C-4), 153.6 (C-1′), 137.3 (C-5a), 136.4 (C-3′), 131.5 (C-5′), 128.9 (C-7), 127.2 (C-3a), 126.7 (C-9), 125.7 (C-6), 121.5 (C-9a), 120.8 (C-8), 117.1 (C-4′), 116.0 (C-2′), 115.2 (C-6′), 114.8 (C-1), 114.0 (C-2), 108.2 (C-3), 49.9 (CH2-pip), 49.2 (CH2-pip), 33.9 (CH2). Anal. calcd for C21H19ClN4: C, 69.51; H, 5.28; N, 15.44. Found: C, 69.67; H, 5.07; N, 15.30.
4-[4-(6-Chloro-5-trifluoromethylpyridin-2-yl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1q). White crystals (43%); mp 146 °C. 1H NMR (CDCl3) δ 7.88–7.86 (m, 1H, H-1), 7.77–7.73 (m, 2H, H-9 and H-6), 7.72 (d, 1H, J = 8.70 Hz, H-4′), 7.39–7.29 (m, 2H, H-7 and H-8), 6.86–6.80 (m, 2H, H-2 and H-3), 6.51 (d, 1H, J = 8.70 Hz, H-3′), 4.00–3.97 (m, 4H, CH2-pip), 3.89–3.86 (m, 4H, CH2-pip). 13C NMR (CDCl3) δ 160.6 (C-2′), 153.7 (C-4), 149.0 (q, J = 1.6 Hz, C-6′), 139.0 (q, J = 4.5 Hz, C-4′), 137.2 (C-5a), 128.9 (C-7), 127.2 (C-3a), 126.7 (C-9), 125.7 (C-6), 124.7 (q, J = 269.0 Hz, CF3), 121.3 (C-9a), 116.0 (C-8), 114.7 (C-1), 114.1 (C-2), 113.8 (q, J = 32.2 Hz, C-5′), 108.2 (C-3), 104.5 (C-3′), 48.6 (CH2-pip), 45.7 (CH2-pip). Anal. calcd for C21H17ClF3N5: C, 58.40; H, 3.97; N, 16.22. Found: C, 58.28; H, 4.07; N, 16.12.
7-Methoxy-4-[4-(2-trifluoromethylphenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1r). Yellow oil (79%). 1H NMR (CDCl3) δ 7.78–7.74 (m, 1H, H-1), 7.65 (d, 1H, J = 7.80 Hz, H-3′), 7.64 (d, 1H, J = 8.00 Hz, H-9), 7.51 (t, 1H, J = 7.80 Hz, H-5′), 7.43 (d, 1H, J = 7.80 Hz, H-6′), 7.33 (t, 1H, J = 7.80 Hz, H-4′), 7.20 (d, 1H, J = 2.60 Hz, H-6), 6.91 (dd, 1H, J = 8.00 and 2.60 Hz, H-8), 6.80–6.78 (m, 1H, H-3), 6.76–6.74 (m, 1H, H-2), 3.91–3.84 (m, 7H, CH3O and CH2-pip), 3.13–3.07 (m, 2H, CH2), 2.84–2.74 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 158.7 (C-7), 154.3 (C-4), 140.3 (q, J = 3.2 Hz, C-1′), 138.7 (C-5a), 133.1 (q, J = 0.8 Hz, C-6′), 133.0 (C-5′), 130.0 (q, J = 29.4 Hz, C-2′), 127.6 (C-9), 127.3 (q, J = 5.6 Hz, C-3′), 126.0 (q, J = 272.2 Hz, CF3), 121.5 (C-3a), 121.1 (C-9a), 115.5 (C-4′), 115.4 (C-8), 113.9 (C-1), 113.5 (C-2), 110.7 (C-3), 107.9 (C-6), 61.6 (NCH2), 57.0 (CH3O), 54.5 (CH2-pip), 49.4 (CH2-pip), 31.4 (CH2). Anal. calcd for C25H25F3N4O: C, 66.07; H, 5.54; N, 12.33. Found: C, 65.94; H, 5.67; N, 12.20.
8-Methoxy-4-[4-(2-trifluoromethylphenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1s). Yellow oil (64%). 1H NMR (CDCl3) δ 7.73–7.71 (m, 1H, H-1), 7.66 (d, 1H, J = 8.70 Hz, H-6), 7.65 (d, 1H, J = 7.60 Hz, H-3′), 7.48 (t, 1H, J = 7.60 Hz, H-5′), 7.40 (d, 1H, J = 7.60 Hz, H-6′), 7.31 (t, 1H, J = 7.60 Hz, H-4′), 7.19 (d, 1H, J = 2.40 Hz, H-9), 6.95 (dd, 1H, J = 8.70 and 2.40 Hz, H-7), 6.79–6.77 (m, 2H, H-2 and H-3), 3.90 (s, 3H, CH3O), 3.79–3.78 (m, 4H, CH2-pip), 3.11–3.06 (m, 2H, CH2), 2.80–2.69 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 158.2 (C-8), 152.9 (C-4), 140.2 (q, J = 1.65 Hz, C-1′), 133.2 (q, J = 0.9 Hz, C-6′), 133.1 (C-5′), 131.6 (C-5a), 130.1 (q, J = 29.3 Hz, C-2′), 130.0 (C-6), 127.8 (C-3a), 127.6 (C-4′), 127.3 (q, J = 5.6 Hz, C-3′), 126.0 (q, J = 272.1 Hz, CF3), 121.9 (C-9a), 115.4 (C-7), 114.0 (C-1), 113.6 (C-2), 107.8 (C-3), 99.3 (C-9), 61.7 (NCH2), 57.1 (CH3O), 54.5 (CH2-pip), 49.7 (CH2-pip), 31.4 (CH2). Anal. calcd for C25H25F3N4O: C, 66.07; H, 5.54; N, 12.33. Found: C, 66.20; H, 5.44; N, 12.46.
Ethyl 4-[4-(2-trifluoromethylphenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline-2-carboxylate (1t). Pale-yellow crystals (66%); mp 118 °C. 1H NMR (CDCl3) δ 8.33 (s, 1H, H-1), 7.75 (d, 1H, J = 8.00 Hz, H-9), 7.67 (d, 1H, J = 8.00 Hz, H-6), 7.64 (d, 1H, J = 7.50 Hz, H-3′), 7.49 (t, 1H, J = 7.50 Hz, H-5′), 7.43 (d, 1H, J = 7.50 Hz, H-6′), 7.41–7.26 (m, 3H, H-7, H-8 and H-4′), 7.19 (s, 1H, H-3), 4.39 (q, 2H, J = 7.20 Hz, OCH2), 3.89–3.87 (m, 4H, CH2-pip), 3.10–3.05 (m, 2H, CH2), 2.79–2.69 (m, 6H, CH2 and CH2-pip), 1.42 (t, 2H, J = 7.20 Hz, CH3). 13C NMR (CDCl3) δ 165.7 (CO), 153.6 (C-4), 140.2 (C-1′), 137.9 (C-5a), 133.1 (C-5′), 133.0 (C-7), 130.0 (q, J = 30.0 Hz, C-2′), 129.0 (C-9), 127.7 (C-6), 127.6 (C-6′), 127.3 (q, J = 5.6 Hz, C-3′), 126.3 (C-3a), 126.0 (q, J = 272.2 Hz, CF3), 125.6 (C-4′), 121.9 (C-9a), 120.5 (C-2), 119.0 (C-8), 114.9 (C-1), 109.2 (C-3), 61.9 (OCH2), 61.6 (NCH2), 54.4 (CH2-pip), 49.2 (CH2-pip), 31.4 (CH2), 15.9 (CH3). Anal. calcd for C27H27F3N4O2: C, 65.31; H, 5.48; N, 11.28. Found: C, 65.39; H, 5.29; N, 11.42.
2-Phenyl-4-[4-(2-trifluoromethylphenethyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1u). Pale-yellow crystals (67%); mp 136 °C. 1H NMR (CDCl3) δ 8.08 (s, 1H, H-1), 7.77 (d, 1H, J = 8.10 Hz, H-9), 7.74–7.68 (m, 3H, H-6, H-2′′ and H-6′′), 7.66 (d, 1H, J = 7.50 Hz, H-3′), 7.51 (t, 1H, J = 7.50 Hz, H-5′), 7.49–7.28 (m, 7H, H-4′, H-6′, H-7, H-8, H-3′′, H-4′′ and H-5′′), 7.06 (s, 1H, H-3), 3.93–3.90 (m, 4H, CH2-pip), 3.13–3.07 (m, 2H, CH2), 2.84–2.72 (m, 6H, CH2 and CH2-pip). 13C NMR (CDCl3) δ 153.4 (C-4), 140.2 (C-1′′), 137.3 (C-5a), 135.7 (C-1′), 133.4 (C-5′′), 133.3 (C-7), 130.3 (C-3′ and C-5′), 129.9 (q, J = 29.3 Hz, C-2′′), 129.1 (C-9), 128.4 (C-4′), 128.0 (C-6), 127.6 (C-3a), 127.5 (C-2′ and C-6′), 127.4 (C-6′′), 127.0 (C-2), 126.7 (C-3′′), 125.9 (C-8), 125.7 (q, J = 272.2 Hz, CF3), 125.6 (C-4′′), 122.2 (C-9a), 114.7 (C-2), 112.6 (C-1), 105.7 (C-3), 61.2 (NCH2), 53.9 (CH2-pip), 48.7 (CH2-pip), 30.7 (CH2). Anal. calcd for C30H27F3N4: C, 71.98; H, 5.44; N, 11.19. Found: C, 72.06; H, 5.53; N, 11.35.
2-Phenyl-4-[4-(3-trifluoromethylbenzyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1v). Yellow oil (54%). 1H NMR (CDCl3) δ 8.07 (s, 1H, H-1), 7.76 (d, 1H, J = 7.80 Hz, H-9), 7.73–7.69 (m, 4H, H-6, H-4′, H-2′′ and H-6′′), 7.63–7.56 (m, 2H, H-7 and H-8), 7.51–7.43 (m, 3H, H-2′, H-3′′, H-5′′), 7.37–7.28 (m, 3H, H-5′, H-6′ and H-4′′), 7.04 (s, 1H, H-3), 3.89–3.86 (m, 4H, CH2-pip), 3.67 (s, 2H, NCH2), 2.71–2.69 (m, 4H, CH2-pip). 13C NMR (CDCl3) δ 153.8 (C-4), 140.3 (C-1′′), 137.4 (C-5a), 135.8 (C-1′), 133.9 (C-6′′), 132.0 (q, J = 32.0 Hz, C-3′′), 130.3 (C-3′ and C-5′), 130.2 (C-7), 129.8 (C-3a), 128.9 (C-9), 128.3 (C-4′), 127.4 (C-2′ and C-6′), 127.2 (C-5′′), 127.1 (q, J = 3.75 Hz, C-2′′), 126.9 (C-2), 126.7 (C-6), 125.6 (C-8), 125.5 (q, J = 3.9 Hz, C-4′′), 125.4 (q, J = 271.3 Hz, CF3), 122.3 (C-9a), 114.6 (C-2), 112.4 (C-1), 105.8 (C-3), 63.8 (NCH2), 54.4 (CH2-pip), 49.3 (CH2-pip). Anal. calcd for C29H25F3N4: C, 71.59; H, 5.18; N, 11.52. Found: C, 71.75; H, 5.08; N, 11.57.
2-Phenyl-4-[4-(4-trifluoromethylbenzyl)piperazinyl]pyrrolo[1,2-a]quinoxaline (1w). Yellow oil (76%). 1H NMR (CDCl3) δ 8.08 (d, 1H, J = 0.90 Hz, H-1), 7.79 (dd, 1H, J = 7.80 and 1.80 Hz, H-9), 7.71–7.67 (m, 3H, H-6, H-2′′ and H-6′′), 7.64–7.55 (m, 2H, H-7 and H-8), 7.48–7.42 (m, 2H, H-3′′ and H-5′′), 7.35–7.29 (m, 3H, H-2′, H-6′ and H-4′′), 7.02 (d, 1H, J = 0.90 Hz, H-3), 3.88–3.85 (m, 4H, CH2-pip), 3.68 (s, 2H, NCH2), 2.72–2.69 (m, 4H, CH2-pip). 13C NMR (CDCl3) δ 153.8 (C-4), 143.8 (q, J = 1.0 Hz, C-1′′), 137.5 (C-5a), 135.8 (C-1′), 130.7 (q, J = 28.3 Hz, C-4′′), 130.6 (C-7), 130.3 (C-3′ and C-5′), 129.7 (C-3a), 129.0 (C-9), 128.3 (C-4′), 127.4 (C-2′ and C-6′), 126.7 (C-6), 126.6 (q, J = 6.3 Hz, C-3′′ and C-5′′), 126.5 (q, J = 3.5 Hz, C-2′′ and C-6′′), 125.6 (q, J = 267.8 Hz, CF3), 125.5 (C-8), 122.4 (C-9a), 114.6 (C-2), 112.4 (C-1), 105.7 (C-3), 63.9 (NCH2), 54.5 (CH2-pip), 49.4 (CH2-pip). Anal. calcd for C29H25F3N4: C, 71.59; H, 5.18; N, 11.52. Found: C, 71.72; H, 5.04; N, 11.48.

X-ray crystallography studies

Crystallographic data of compounds 1a and 1h were collected at 293 K with an Enraf-Nonius CAD-4 diffractometer with monochromatic Cu-Kα radiation (l = 1.54178 Å). The collected data were reduced using the NONIUS CAD4 software and all reflections were used for unit-cell refinement. Then the data were corrected for Lorentz and polarization effects and for empirical absorption correction.51 The structure was solved by direct methods Shelx 2013 (ref. 52) and refined using Shelx 201352 suite of programs.

Colorless single crystal of 1a was obtained by slow evaporation from dichloromethane/methanol solution (70/30; v/v): triclinic, space group P[1 with combining macron], a = 9.5233(14) Å, b = 10.8011(19) Å, c = 11.8823(16) Å, α = 107.688(11)°, β = 110.089(10)°, γ = 100.552(11)°, V = 1035.6(3) Å3, Z = 2, δ (calcd) = 1.259 Mg m−3, FW = 392.49 for C26H24N4, F(000) = 416. Colorless single crystal of 1h was obtained by slow evaporation from methanol/dichloromethane (20/80; v/v): triclinic, space group P[1 with combining macron], a = 9.471(10) Å, b = 13.021(6) Å, c = 19.887(6) Å, α = 77.83(4)°, β = 81.76(8)°, γ = 87.25(6)°, V = 2372(3) Å3, Z = 2, δ (calcd) = 1.266 Mg m−3, FW = 904.29 for 2C29H27FN4, 0.1H2O, F(000) = 955.

Full crystallographic results have been deposited at the Cambridge Crystallographic Data Centre (CCDC-891809, CCDC-891808, respectively), UK, as ESI.53

Biological studies

Yeast strains and growth media. All the yeast strains were grown in yeast extract peptone-dextrose (YEPD) broth (HiMedia) and for agar plates, 2.5% (w/v) Bacto agar (Difco, BD Biosciences) was added to the medium. The S. cerevisiae strain used as a heterologous host for the expression of Cdr1 and Mdr1 proteins was AD1-8u, provided by Richard D. Cannon, University of Otago, Dunedin, New Zealand. The host AD1-8u having seven major ABC transporters deleted was suitably modified to clone GFP-tagged Cdr1protein and its mutant variants.54 The yeast strains AD1-8u, AD-CDR1, AD-MDR1 (ref. 55–57) were cultured at 30 °C. No trailing effect of the compound or fluconazole was observed and the false negatives were ruled out as we compare our experimental data with negative control that is AD1-8u strain (empty vector strain). 15% glycerol stocks of these strains were maintained in −80 °C storage that were freshly revived on YEPD before use.
Reagents and media. Nile Red (>98%), curcumin (purity ≥ 99.5%), and verapamil (purity ≥ 99%) were obtained from Sigma Chemical Co. Fluconazole (>98%) was obtained from Ranbaxy and [3H]-fluconazole (20 Ci mmol−1) was provided by Moravek Biochemicals and Radiochemicals. All routine chemicals were obtained from HiMedia and were of analytical grade.
Statistical analysis. Data are the means ± SD from duplicate samples of at least three independent experiments. Differences between the mean values were analyzed by Student's t test (GraphPad QuickCalcs: t, test calculator), and the results were considered as significant when p < 0.05.
Transport assays. Transport assays were implemented by following the accumulation of Nile Red by flow cytometry with a FACsort flow cytometer (Becton-Dickinson Immunocytometry Systems) in cells overexpressing MDR transporters CaCdr1p (AD-CDR1) or CaMdr1p (AD-MDR1). Briefly, the cells with an OD600 of 0.1 were inoculated, which were allowed to grow at 30 °C with shaking, until the OD600 reached 0.25. The cells were then harvested and resuspended as a 5% cell suspension in diluted medium (containing one part of YEPD and two parts of water). Nile Red was added to a final concentration of 7 μM, and the cells were incubated at 30 °C for 30 min in absence or presence of each inhibitor at a concentration 10-fold higher than substrate (70 μM). The cells were then harvested and 10[thin space (1/6-em)]000 cells were analyzed in the acquisition. The analysis was performed using the CellQuest software (Becton Dickinson Immunocytometry Systems). Efflux of 100% was attributed to the cells not exposed to Nile Red and normalized with the efflux mediated via MDR transporters.
Confocal microscopy. Confocal imaging of GFP-tagged Cdr1p and Mdr1p was performed with a Bio-Rad confocal microscope (MRC 1024) with a 100× oil immersion. The cells were washed and resuspended in an appropriate volume of 50 mM HEPES (pH 7.0). The cells were placed on the glass slides, and a drop of antifade reagent (Fluoroguard high-performance antifade reagent, Bio-Rad, Hercules, CA, USA) was added to prevent photobleaching.55
Cytotoxicity and fractional inhibitory concentration index (FICI) determination. Yeast cells (104) were seeded into 96-well plates in either absence or presence of varying concentrations of inhibitors (3–800 μM), and grown for 48 h at 30 °C. The optical density of each strain at 600 nm was measured for the cell growth. The growth in the absence of any inhibitor was considered as 100%, and the concentration producing 80% of cell growth inhibition was taken as the MIC80 value; the resistance index (RI) was calculated as the ratio between the MIC80 values determined for the strain overexpressing either CaCdr1p (AD-CDR1) or CaMdr1p (AD-MDR1) relative to that of the control strain (AD1-8u). The interaction of the respective inhibitors with fluconazole was evaluated by the checkerboard method43 and was expressed as FICI. The ranges of concentrations used were 1.25–65 μM for fluconazole, and 3–800 μM for the inhibitors. FICI values were calculated as the sum of the FICs of each agent (fluconazole and inhibitors). The FIC of each agent was calculated as the MIC80 of the agent in combination divided by the MIC80 of the agent alone.

Conflicts of interest

There are no conflicts to declare.

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Footnotes

Electronic supplementary information (ESI) available. CCDC 891808 and 891809. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/c9ra09348f
These authors contributed equally to this work.

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