Romain Plaisa,
Hamza Boufrouraa,
Guy Gouarina,
Anne Gauchera,
Violette Haldysbc,
Arnaud Brosseaud,
Gilles Clavierd,
Jean-Yves Salpinbc and
Damien Prim*a
aUniversité Paris-Saclay, UVSQ, CNRS, Institut Lavoisier de Versailles, 78035, Versailles, France. E-mail: damien.prim@uvsq.fr
bUniversité Paris-Saclay, Univ Evry, CNRS, LAMBE, 91025, Evry-Courcouronnes, France
cLAMBE, CY Paris Cergy Université, CNRS, 95000 Cergy, France
dUniversité Paris-Saclay, ENS Paris-Saclay, CNRS, PPSM, 91190, Gif-sur-Yvette, France
First published on 3rd March 2021
A molecular clip combining a doubly substituted fluorescent anion–π donor probe and two flexible arms bearing H-bond motifs constitutes a new generation of anion receptors. Five simultaneous non-covalent interactions are highlighted by theoretical complexation studies with five different anions. A large range of analytical techniques (electrospray-tandem mass spectrometry, NMR, UV-visible, steady-state and time-resolved fluorescence) were deployed to evaluate the stoichiometry and association constants with the selected anions. The photophysical and anion–π donor properties of the tetrazine ring allowed fine characterization of the binding properties of the ligand. Based on previously published results, an anti-cooperativity effect in non-covalent interactions was demonstrated.
Thus, the combination of non-covalent interactions is a promising strategy to bind anions, but also to construct supramolecular assemblies like folding structures or polymers.8–10 We recently turned our attention to a mix of hydrogen bonding and anion–π interaction. Such combination has been studied theoretically by Liu and coworkers,11–14 showing interesting cooperative effects between interactions. Despite these interesting reports, few studies in solution have been published to date.15–18
Following our interest in non-covalent interactions,19,20 we focused on the tetrazine ring, which exhibits both excellent photophysical21–24 and anion–π binding properties.25,26 We recently showed that photophysical properties are particularly useful to characterize anion complexes in solution in a new anion receptor (1) combining a tetrazine and an urea subunits linked by a short flexible arm.27
Examination of the receptor 1 shows that an extra position is available at the tetrazine core for installing an additional urea motif (Scheme 1). We hypothesized that a second nucleophilic aromatic substitution (SNAr) would enable access to a new family of anion receptors. In this context, the following questions arose from this design: will folding really occur in solution? What type of complex will be formed? Which interactions will help maintaining this complex? To address these different points, we report the synthesis and exploration of anion binding properties of a double-armed anion receptor, comprising a theoretical approach and a broad scope of experimental methods, namely electrospray-tandem mass spectrometry, NMR, UV-visible and steady state fluorescence as well as time-resolved fluorescence.
The receptor 2 adopts a linear conformation in which each arm is almost orthogonal to the tetrazine core. The linear conformation might be partly due to (i) the minimization of repulsive interactions between the tetrazine and each of the two arms, and (ii) the anti conformation of both N and O atoms with respect to the linear CH2–CH2 fragment (Table 1, entry 1, NCIplot). The receptor thus acquires a Z-shaped conformation which overall geometry is set by interactions including: (i) protons of the aliphatic spacer with nitrogen atoms of the tetrazine and oxygen atom of the ureas, respectively, (ii) ortho protons of the terminal aromatic ring with the oxygen atom of the urea, favoring a linear conformation between urea and aromatic ring. Different regions showing a deficit of electron density (in blue) are visible around the center of the tetrazine ring, on the N–H hydrogen bond donors and the aromatic substituent of the urea moiety, thus highlighting possible binding sites for anions (Table 1, entry 1, ESP).
Optimized geometries of 2–anion complexes are characterized by a marked folding of the receptor that wraps around the different anions (Table 1, optimized geometries). This folding tends to maximize attractive interactions between anions and both ureas and tetrazine moieties (Table 1, NCIplots). Large green dish-shaped surfaces between tetrazine and Cl, Br and I anions are observed, significant of anion–π interactions. Interestingly, in the case of SCN anion, the NCI plot did not evidence any surface representative of a weak interaction between the tetrazine and the anion. In contrast, the overall shape of complex 2–PF6 is only set by a weak anion–π interaction with hexafluorophosphate in which only one of the fluorine atoms of the anion is involved.
Moreover, in all the complexes studied, four small blue disk-shaped surfaces indicate the joint formation of four hydrogen bonds between ureas and anions.
To characterize the folding process, angles between key structural fragments were measured using Chimera Software.30 As shown in Table 2, conformation of the complex is deeply impacted by the anion geometry. In fact, the receptor can be defined by three main planes connected together by O–CH2–CH2 flexible units: two planes A and B composed by aryl-urea fragments of each arms and one plane corresponding to the tetrazine heterocycle. In the receptor 2, the two urea arms are U-shaped with an angle of 31° (Table 2, entry 1 and Fig. 1a) with each urea pointing outside of the cavity.
Fig. 1 Views of the orientation of urea arms respectively to each other in (a) the receptor alone, (b) the chloride complex. |
In the presence of spherical anions, in 2–Cl, 2–Br and 2–I, a conformation in which the two urea motifs are cross-shaped and face each other is observed (Fig. 1b). An angle of 63° is measured between the two planes A and B for 2–Cl. As the polarizability of the anion increases, the angle between planes A and B become more flattened (Table 2, entry 1). Moving from spherical to linear (SCN) and hexahedral (PF6) anions impacts the 3D-shape of the corresponding complexes. Orientation of aryl-urea planes with respect to tetrazine is characteristic of the molecular architecture of complexes. The A arm is almost orthogonal for 2–Cl and 2–Br. The orientation of this arm then become more flattened as the size of the anion increases (Table 2, entry 2). The B arm then adapts to the global conformation with more flattened angles towards tetrazine (Table 2, entry 3). In the case of the linear thiocyanate anion, the two lateral arms are almost parallel. Most likely, a favorable interaction between the electrodeficient aromatic ring of one arm and the urea of the other arm is observed as evidenced by the corresponding NCI plot (Table 1, entry 5).
Structural distances were also measured in order to see the influence of anion binding on different bonds in the case of complexation with spherical anions (Table 3). Receptor 2 displays almost the same four N–H bond lengths. Complexation of anions implies an increase of N–H bond lengths, significant of the complexation process (Table 3, entries 1 to 4). An increase of both the size and polarizability of the anion X− implies a concomitant shortening of N–H bond lengths (Table 3, entries 1 to 4) and an elongation of H–X distances (Table 3, entries 5 to 8), characteristic of a decrease of the hydrogen bonding interaction. Influence of electrowithdrawing groups onto the H–X distances is observed (Table 3, entries 5 to 8). As the polarizability of the anion increases, the length of H–X bonds increases. In all complexes, a shortening of H–X distances is observed for Ha and Hd that are close to the bis(trifluoromethyl)phenyl group, compared to Hb and Hc. Distances between anion and centroid of tetrazine ring were also determined (Table 3, entry 9).30 These distances are close for Cl− (3.31 Å) and Br− (3.42 Å) but markedly increased for I− (3.79 Å). The orientation of the tetrazine ring towards the halide anions is also impacted by the presence of the two urea units. Indeed, in 2–Br, similar Ne–X, Nf–X, Ng–X and Nh–X distances are observed (Table 3, entries 10 to 13), representative of an almost cofacial arrangement between the tetrazine and the urea/Br planes. In contrast, in both 2–Cl and 2–I, Ne–X, Nf–X, Ng–X and Nh–X distances differ markedly from each other, inducing a twist of the tetrazine ring with respect to the 2–Br case.
Entry | Bonda | 2 | 2–Cl | 2–Br | 2–I |
---|---|---|---|---|---|
a Distances in Å. | |||||
1 | Na–Ha | 1.009 | 1.026 | 1.026 | 1.023 |
2 | Nb–Hb | 1.009 | 1.023 | 1.022 | 1.020 |
3 | Nc–Hc | 1.008 | 1.022 | 1.020 | 1.020 |
4 | Nd–Hd | 1.010 | 1.027 | 1.027 | 1.026 |
5 | Ha–X | — | 2.190 | 2.343 | 2.617 |
6 | Hb–X | — | 2.256 | 2.440 | 2.702 |
7 | Hc–X | — | 2.243 | 2.464 | 2.745 |
8 | Hd–X | — | 2.223 | 2.310 | 2.533 |
9 | X–centroid | — | 3.313 | 3.421 | 3.785 |
10 | Ne–X | — | 3.494 | 3.761 | 4.109 |
11 | Nf–X | — | 3.664 | 3.753 | 3.877 |
12 | Ng–X | — | 3.561 | 3.851 | 4.223 |
13 | Nh–X | — | 3.736 | 3.854 | 4.017 |
We then tried to obtain structural information about the [(2)n–X]− anions. Starting with [(2)2–X]− species, their unimolecular dissociation upon collision induced dissociation (CID) is solely characterized by the elimination of the intact receptor 2 (presently illustrated by Fig. 2-c), excepting the chloride adduct (X = Cl), which also expels a small fraction of hydrogen chloride (Fig. S10†). Then, we concentrated our effort to the study of the 1:1 complexes, namely the [(2)–X]− ions adducts. To this end, we recorded a series of MSn spectra (n = 2–4), which resulted in the following fragmentation scheme.
The overall fragmentation picture strongly depends on the nature of X. Like for the anionic receptor 1, the only fragmentation observed in presence of PF6−, is the formation of PF6−, again suggesting a very weak interaction in the gas phase with this anion. For the four remaining adducts, several common fragmentations are observed, and notably the elimination of HX, leading to deprotonated receptor [(2)–H]− (m/z 709). Like with the smaller receptor 1, the extent of deprotonation of 2 and concomitant formation of HX is correlated to the gas-phase acidity of HX (or basicity of X−).31 It corresponds to the main primary process with and Cl− and SCN− which are more basic in the gas phase than Br− and I−. Its abundance then logically decreased for Br− and is even weaker for I− In addition, MS3 experiments showed that the main fragment ions observed onto the MS/MS spectra of [(2)–SCN]− and [(2)–Cl]− ions, namely m/z 622 and 454, can arise from dissociation of [(2)–H]−, and according to our MS4 data, the former further dissociates to give m/z 324, whereas the latter gives rise to m/z 367, 199 and 156 ions. Consequently, for both Cl− and SCN− anions, most of the fragments ions observed imply preliminary formation of the deprotonated receptor, m/z 709. Reasonably, its formation may imply removal of one of the urea protons, and one may assume that removal of Ha or Hd should be more favorable due to resulting stabilization of the anionic charge through resonance with the aromatic ring. Removal of Ha is also consistent with the greater lengthening of Na–Ha and Nd–Hd bonds with respect to Nb–Hb and Nc–Hc bonds evidenced by the calculations. Observation of deprotonation for all anions but PF6− therefore indicates a strong interaction of the anion with the urea moiety, as evidenced by the geometrical parameters from theoretical study.
Fragment ions arising from alternate primary processes become significant with bromide and iodide anions, as the extent of formation of [(2)–H]− decreases with the decrease of the basicity of X−. This is illustrated in Fig. 2-b, with the presence of m/z 534, 491, and 411. Note that the two former ions are shifted to m/z 582 and 539, respectively, with iodide. This means that the fragment ion generated incorporates the anion. Indeed, if one considers this second common fragmentation (top left of Scheme 3), the formation of [C15H15F6XN7O3]− can be rationalized by assuming in a first step the direct attack of the tetrazine moiety by X−, followed by elimination of a C9H3NOF6 moiety. Consequently, this mechanism, together with the formation of [C13H10N6O3F6X]−, suggest an interaction of X− with the tetrazine motif, prior to dissociation.
Finally, we also studied the fragmentation of the doubly-charged complexes observed with the halogens, [(2)–X2]2−. Their fragmentation spectra turned to be not informative, as characterized by a charge separation process leading to X− and [(2)–X]− ions.
1H NMR titration spectra of 2 with Cl− is reported in Fig. 3. In CD3CN, the iterative addition of chloride anion to the receptor leads to substantial modifications of the 1H NMR spectrum. Mainly, a large downfield shift of the two mobile proton signals of both ureas is observed. Following the theoretical study and mass spectrometry experiments, a cooperative binding of the two urea partners to a similar extent is therefore observed. However, if both protons are downshifted, each of the two signals is differently impacted. Ha/Hd undergoes a shift from 7.74 to 10.93 ppm (ΔδCl–Ha/Hd = 3.19 ppm) and Hb/Hc from 5.77 to 7.43 ppm (ΔδCl–Hb/Hc = 1.66 ppm). The difference likely arises from the proximity of the electron withdrawing aromatic fragment proximal to Ha/Hd. These shifts are consistent with previously observed values for the monosubstituted compound 1.27 Titration was then extended to other spherical anions (Fig. S18 [Br] and S20 [I]†). The same trend was observed with Br (ΔδBr–Ha/Hd = 2.74 ppm at 50 equivalents). With I, downfield shifts of urea protons arise compared to 1 (ΔδI–Ha/Hd = 1.96 ppm at 150 equivalents). Once again, shifts of Ha/Hd were increased compared to Hb/Hc. Comparison of differences in shifts observed as a function of the number of equivalents of salt added was plotted in Fig. 4. The reachpoint observed for each anion is decreasing with the size of the anion, implying a stronger interaction between Cl and 2 than between Br or I and 2 in decreasing order.
Fig. 3 (a) NMR titration of anion receptor 2 by chloride anion (0 to 13 equivalents) (b) proton attribution. |
Fig. 4 ΔδHa/Hd plotted as a function of the number of equivalents of NBu4X (X = Cl, Br and I) added for protons Ha/Hd. |
Titration was next performed on the linear anion SCN−. The same approach led to a 1H NMR spectrum which showed similar features (Fig. S22†). Signals of Ha/Hd and Hb/Hc are downshifted upon progressive addition of SCN− with ΔδSCN–Ha/Hd = 1.81 ppm and ΔδSCN–Hb/Hc = 0.80 ppm, suggesting a weaker interaction with thiocyanate anion. Finally, in the case of PF6−, no significant shift was observed upon addition of 5 equivalents of the anion, implying a lack of interaction between 2 and PF6−.
As observed previously, the marked decrease of ΔδX–Ha/Hd and ΔδX–Hb/Hc moving from Cl− to SCN− is indicative of the general binding affinity trend between 2 and the anions. To clarify and confirm this tendency, binding constants of the corresponding complexes were determined using two different methods: a single proton method determined by Gonzàlez-Gaitano et al. using 1:1 host:guest binding model,32 and a global analysis of three protons shifts using SPECFIT® software.33 The first method is based on the differences in chemical shifts observed (Δδ) plotted as a function of number of equivalents of NBu4X added (Table 4, Fig. 4, S16 to S24†).
As deduced from 1H NMR spectra analysis, all complexes fit well with 1:1 host guest binding model (relative errors of fits <1.5%) which is consistent with the hypothesis of folding in solution. 2–Cl exhibits the strongest binding constant of the series of anions studied (424 L mol−1). Moreover, a decrease is observed from 2–Br (296 L mol−1) to 2–I (20 L mol−1) and 2–SCN (11 L mol−1), and no binding constant could be determined for 2–PF6.
The absorption spectrum of 2 was recorded in acetonitrile. It displays four absorption maxima at 520, 343, 290 and approx. 235 nm (Fig. S5†). A TDDFT calculation (PBE/6–311++G(d,p) level) has been done to assign these bands (Fig. S26 to S28†). The two former bands could be attributed to the n → π* and π → π* transitions of tetrazine, respectively, whereas the two latters could be assigned to π → π* transitions centered on urea moiety bearing a bis-3,5-trifluoromethylenephenyl substituent. Fluorescence emission displays the typical emission of tetrazine substituted by two oxygen atoms with a maximum at 572 nm. A quantum yield of 8.5% was measured in acetonitrile for 2 (Fig. S25†). These results are in line with our previous publications.23,27
UV-visible spectra measured during the titration of 2 with chloride anion are reported in Fig. 5. We can observe different behaviours depending on the transition considered. Both hyperchromic and bathochromic shifts are observed on π–π* urea centred transitions due to the addition of chloride anion, consistent with a complexation mechanism. The π–π* bands of tetrazine moiety display a distinct behaviour with a hypochromic and bathochromic shift with the apparition of an isosbestic point at 349 nm. Similarly, an isosbestic point is observed in the case of bromide anion (Fig. S37†). Finally, the n–π* transition is weakly affected by the addition of chloride anion. Association constants for 1:1 binding model were determined using the SPECFIT software (Table 5). The value obtained for chloride anion is much larger than for other anions, indicative of a marked selectivity of receptor 2 for chloride anion.
Fig. 5 Absorption spectra measured during the titration of 2 with tetrabutylammonium chloride (0 to 11 equivalents of NBu4Cl): (a) total spectra, (b) zoom. |
Entry | KA,abs,SPECFITa | KA,fluoa | KA,fluo,SPECFITa | KA,decaya | |
---|---|---|---|---|---|
a Binding constants in L mol−1.b No binding was observed. | |||||
1 | 2–Cl | 11990 ± 1 (1%) | 27141 | 27886 ± 1 (1%) | 30000 |
2 | 2–Br | 196 ± 1 (2.1%) | 1325 | 1267 ± 1 (1.0%) | 1300 |
3 | 2–I | 8 ± 1 (0.5%) | 564 | 514 ± 1 (1.7%) | 237 |
4 | 2–SCN | 18 ± 1 (0.6%) | 491 | 499 ± 1 (2.5%) | 899 |
5 | 2–PF6 | —b | —b | —b | —b |
In the case of both iodide and thiocyanate, UV-vis titrations (Fig. S45 [I−] and S53 [SCN−]†) showed small hyperchromic shifts of π–π* transitions of ureas. No isosbestic point and no significant shifts were observed for π–π* and n–π* transitions of tetrazine. From these results, we can conclude that the major interaction involved in the complexation process is the hydrogen bonding with ureas.
Emission quenching is also anion dependant. As can be seen for both chloride and bromide (Fig. 6 [Cl−] and S39 [Br−]),† partial emission quenching is noted. A weak interaction between the tetrazine moiety and the anion is therefore underlined, which is attributed to the formation of a weak anion–π interaction. This property has been already used in the characterization of anion–π interaction in solution by us27 and others.34 Despite the large excess of salts added, a complete quenching cannot be reached. This behaviour indicates that complexes between 2 and chloride or bromide anions, respectively, exhibit a residual fluorescence. Such phenomenon will be further studied by time-resolved fluorescence.
Fig. 6 Fluorescence spectra measured during the titration of 2 with tetrabutylammonium chloride (0 to 11 equivalents of NBu4Cl). |
On the other hand, in the case of iodide and thiocyanate anions (Fig. 7 [I−] and S55 [SCN−]),† addition of a large excess of anion leads to complete fluorescence quenching, characteristic of a stronger anion–π interaction with more polarizable anions.
Fig. 7 Fluorescence spectra measured during the titration of 2 with tetrabutylammonium iodide (0 to 200 equivalents of NBu4I). |
From these data, new values of association constants were extracted (Table 5) by employing two methods: a global spectral analysis with the SPECFIT software (KA,fluo SPECFIT) and a single wavelength nonlinear least squares analysis (KA,fluo, see ESI† for details). Once again, 1:1 host:guest binding model was adapted to all complexes studied. A higher value was observed for chloride anion (27886 L mol−1), followed by bromide anion (1267 L mol−1). Iodide (514 L mol−1) and thiocyanate (499 L mol−1) anions display similar binding constants. No binding constants could be determined for PF6−.
Further insight in the excited state behavior was gained by recording fluorescence decays during the titrations of the various anions. Fluorescence decays of 2 recorded for the titration with tetrabutylammonium chloride are presented in Fig. 8 and S36.† Upon addition of the chloride anion, the initial fluorescence intensity is weakly affected, whereas fluorescence lifetime decreases from 43 ns to 25 ns at one equivalent. Above one equivalent, the fluorescence lifetime remains almost constant. A second exponential with a larger lifetime (∼60 ns) is necessary to fit the decays. The contribution of this second lifetime remains minor during the entire titration. It can therefore be concluded from this titration that 2–Cl is slightly fluorescent and that the tetrazine–anion interaction is mainly dynamic. Moving on to Br− anion (Fig. S42–S44†), a unique lifetime attributed to the formation of a fluorescent complex with a residual lifetime of 22 ns was observed. Therefore, small anions show a weak anion–π interaction, and an equilibrium between complexed and uncomplexed tetrazine is proposed that leads to the dynamic quenching observed (interaction is occurring after excitation of the tetrazine).
Fig. 8 Fluorescence decay titration of 2 with tetrabutylammonium chloride (0 to 11 equivalents of NBu4Cl), logarithmic scale. |
In the case of iodide (Fig. S50 to S52†) and thiocyanate (Fig. S58 to S60†) anions, the behavior is sensibly different since a much larger drop of the initial fluorescence intensity accompanies the shortening of the decay. A more static quenching is observed in this case. An interaction between more polarizable anions therefore exists in the ground state before excitation. After excitation, the tetrazine residue becomes a strong electron attractor, leading to a dynamic quenching.
Footnote |
† Electronic supplementary information (ESI) available: Molecular graphics images were produced using the UCSF Chimera package from the Resource for Biocomputing, Visualization, and Informatics at the University of California, San Francisco (supported by NIH P41 RR-01081). See DOI: 10.1039/d1ra00630d |
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