Liyang Zhu,
Youshi Lan*,
Qian Liu,
Xuan Hao,
Jin Zhou and
Suliang Yang*
Department of Radiochemisty, China Institute of Atomic Energy, Beijing, 102413, China. E-mail: lanyoushi@ciae.ac.cn; ysl79@ciae.ac.cn
First published on 10th November 2021
The complexation of solid uranyl nitrate with tri-n-butyl phosphate (TBP) in supercritical CO2 is quite different from that of a liquid–liquid extraction system because fewer water molecules are involved. Here, the complexation mechanism was investigated by molecular dynamics simulation, emphasising on speciation distribution analysis. In the anhydrous uranyl nitrate system, poly-core uranyl-TBP species [UO2(NO3)2]2·3TBP and [UO2(NO3)2]3·3TBP were formed in addition to the predominant [UO2(NO3)2]·1TBP and [UO2(NO3)2]·2TBP species. The poly-core species was mainly constructed via the linkage of UO⋯U contributed by pre-developed [UO2(NO3)2]·1TBP species. However, in the hydrated uranyl nitrate system, TBP·[UO2(NO3)2]·H2O species form, preventing the formation of the poly-core species. The complexation developed differently depending on the TBP to the uranyl nitrate ratio, the solute densities and the participation of water. It suggested that the kinetically favoring species would gradually convert into the thermodynamically stable species [UO2(NO3)2]·2TBP by ligand exchange.
Due to the high pressure of the supercritical fluid phase, it is difficult to explore the complexation reaction with analytical instrumentation. Molecular dynamic modelling is an alternative method, which has been actively developed for liquid–liquid extraction simulation.8–11 In the liquid–liquid solvent extraction system, it is predicted that uranyl ion complexes with TBP form UO2·NO3·4TBP, UO2·5TBP and UO2·NO3·3TBP·HNO3 in the interface or in the organic phase.12 Guilbaud et al.13 reported the aggregation of UO2(NO3)2(TBP)2 at a high uranium concentration. As for a supercritical CO2 extraction system, only Wipff et al.14,15 investigated the complexation of uranyl nitrate with TBP at the interface of the supercritical CO2/aqueous phase. Since a large amount of H2O molecules are involved in the simulation, the results are more comparable to the liquid–liquid extraction system. Thus, the complexation of uranyl nitrate with TBP in supercritical CO2 with less water participation is still needed. Also, investigating the distribution of different species evolving with simulation time may be useful to track how the experimental conditions affect the results; however, no study has been reported yet because the number of uranyl nitrate molecules considered is usually limited. Therefore, we aim to investigate the complexation of anhydrous and hydrate uranyl nitrate with TBP in supercritical CO2 and describe the species distribution evolved with the simulation procedure.
The simulation systems were constructed using the Packmol26 software, as listed in Table S2.† The length of the simulation cubic box was either 98 or 150 Å. It was reported that the [UO2(NO3)2]·2TBP complex had high solubility in supercritical CO2,27 which could be up to 0.4 mol L−1. In this study, the concentration of uranyl nitrate was either 0.04 or 0.17 mol L−1. In order to statistically calculate the number of species, up to 100 uranyl nitrates were included in the simulations. All the systems were first relaxed using steepest descent and conjugate gradient minimization algorithm to eliminate any bad contacts. Then, they were heated at gradually increased temperature up to 700 K in an NVT ensemble. At the production stage, an Langevin thermostat was employed for temperature control at 323 K and 20 MPa. Periodic boundary was imposed on the system during the calculation of non-bonded interactions. A cutoff radius was set at 10 Å for nonbonded interactions. The MD trajectories and velocities were calculated with a time step of 1 fs. The SHAKE constraints28 was used for all the hydrogen atoms. Auto-image was employed when writing the coordinates to the restart and trajectory files. The production period of molecular dynamics lasted for 20 ns, and the radial distribution function of uranyl to TBP remained almost unchanged after 20 ns. As the system was relatively large, the GPU code29,30 in Amber 18 was used. After the simulation, the trajectory was visualized by the VMD31 software.
The structures of complexes taken from the trajectories were optimized using B3LYP function. U atom relativistic effects were dealt using the quasi-relativistic effective core potentials (RECPs).32 The adopted small core RECPs had 60 electrons in the core of U (MWB60), and the affiliated segmental basis sets were applied for the valence electrons of U, while the def2-tzvp33 basis set was used for N, H, O and P.
To describe the distribution of species with simulation, for example the uranyl-TBP species, the RDF of uranium with OPO was first calculated, and a cutoff of 3.5 Å was used to determine whether the ligand TBP complexed with uranyl nitrate. The coordinates in different simulation times were extracted to PDB files from the simulation trajectories. And then the residue IDs of the paired uranyl nitrates and the corresponding TBP molecules were generated by using “native contact” command in the cpptraj tool34 from each PDB file. Lastly, discrete frequency counts of the obtained residue IDs of uranyl nitrate was performed twice using a shell script to obtain the number of species at different times. As for the species when uranyl nitrate complexed with TBP and water simultaneously, the contact analysis of uranyl with TBP and water were made separately, and then, the residue IDs of uranyl nitrate in the above output files were cross-indexed to obtain the number of species.
Surprisingly, there were four kinds of uranyl-TBP species identified, [UO2(NO3)2]·1TBP, [UO2(NO3)2]·2TBP, [UO2(NO3)2]2·3TBP and [UO2(NO3)2]3·3TBP, denoted as 1:1, 1:2, 2:3 and 3:3, as illustrated in Fig. 2. The most predominant species were 1:1 and 1:2. The structure of UO2(NO3)2·2TBP was similar to that reported in the literature,35 in which two TBP molecules coordinated with uranyl moiety OUO at the equatorial plane. For the 1:1 species, TBP also coordinated to the uranium from the equatorial plane of the uranyl moiety, and the angle of N⋯U⋯N was approximately 153°, bending towards the side without TBP. The electrostatic potential (ESP) surfaces of the 1:1 and 1:2 species were also generated, as shown in Fig. 2. On the TBP-free side of the 1:1 species, more positive charges leaked out of uranium, and on the ONO3 atom of the 1:2 species, there was more negative charge. The 1:1 and 1:2 species can interact with each other via electrostatic interactions, thus acting as the building blocks of the other species. The structure of 2:3 species was unique, with the two OUO moieties being linked by the cation–cation interactions.36,37 Two types of 2:3 species were identified, of which type I had two N⋯U⋯N axes parallel to each other, while in type II, the N⋯U⋯N axis was arranged in a perpendicular manner. The structure of 3:3 species was constructed by the inner interaction of three OUO, with three N⋯U⋯N axes paralleled to each other. Also, the outer of three OUO clusters was covered by three TBP molecules. The parameters of the four identified species are listed in Table 1. In most cases, the length of the PO bond in TBP was approximately 1.51 Å, but for type I of 2:3 species, there were two PO bonds of 2.34 Å. The bond length of U⋯OPO was measured from 2.30 to 2.38 Å, except for the 1:1 species. It was noticed that some OUO bonds were enlarged because of the cation–cation interaction. Usually, the length was about 1.76 Å, while in the 2:3 species, the bond of UO was enlarged to 1.82 Å. The average distances of U⋯ONO3 were 2.47, 2.54, 2.51 and 2.48 Å for 1:1, 1:2, 2:3 and 3:3 species, respectively, among which, the 1:2 species had the longest U⋯ONO3 distance. In the original uranyl nitrate, the distance of U⋯ONO3 was 2.42 Å, and that of UO was 1.75 Å; thus, the bond length would be enlarged upon complexing with TBP, and the longer distance of U⋯ONO3 may suggest stability of the species.
Fig. 2 The optimized structures of uranyl species formed in supercritical CO2 (the hydrogen atoms were hidden for clarity). |
Species | Bond distance/Å | Angle/degree | ||||
---|---|---|---|---|---|---|
PO | U⋯OPO | OUO | U–ONO3 | U⋯U | N⋯U⋯N | |
[UO2(NO3)2]·1TBP | 1.52 | 2.29 | 1.77, 1.76 | 2.45, 2.47, 2.46, 2.48 | — | 153.3 |
[UO2(NO3)2]·2TBP | 1.51, 1.51 | 2.37, 2.37 | 1.77, 1.77 | 2.53, 2.54, 2.53, 2.54 | — | 178.9 |
[UO2(NO3)2]2·3TBP type I | 1.51, 2.34, 2.34 | 2.36, 2.34, 2.34 | 1.77, 1.77 | 2.50, 2.51, 2.51, 2.50 | 4.21 | 168.9, 176.3 |
1.82, 1.77 | 2.50, 2.51, 2.52, 2.53 | |||||
[UO2(NO3)2]2·3TBP type II | 1.52, 1.52, 1.51 | 2.35, 2.34, 2.34 | 1.77, 1.81 | 2.51, 2.51, 2.51, 2.50 | 4.23 | 177.4, 174.1 |
1.77, 1.76 | 2.51, 2.52, 2.52, 2.52 | |||||
[UO2(NO3)2]3·3TBP | 1.52, 1.52, 1.52 | 2.31, 2.31, 2.35 | 1.81, 1.77 | 2.48, 2.50, 2.47, 2.47 | 4.20, 4.21, 4.21 | 175.3, 173.2, 174.1 |
1.76, 1.81 | 2.48, 2.51, 2.48, 2.46 | |||||
1.81, 1.76 | 2.48, 2.49, 2.49, 2.48 |
RDFU⋯U was calculated from final 5 ns trajectories in different systems, and normalized by the number density of uranyl nitrate, as shown in Fig. 3. There were peaks at approximately 4.5 Å, coincided with the distance of U⋯U in the poly-core species in trajectories, thus indicating the probabilities of poly-core species. There were two factors affecting the formation of poly-core species, which were the ratio of TBP to uranyl nitrate (TBP:U), and the concentration of uranyl nitrate and TBP in the system. When the TBP:U ratio was low, the peak at 4.5 Å was high, indicating that a more poly-core complex formed. Even when the ratio of TBP:U was low, if the concentration of uranyl nitrate and TBP concentration was high, the formation of poly-core species also decreased dramatically. The diffusion constants of uranyl nitrate and TBP were larger for the system with lower solute concentration, as shown in Table 2; however, there was no direct clue to the formation of poly-core species from the diffusion constants.
System | Number of molecules | Diffusion constants (×10−5 cm2 s−1) | ||
---|---|---|---|---|
Uranyl nitrate | TBP | CO2 | ||
I | 100U + 200TBP + 10000CO2 | 0.4932 | 0.6024 | 7.1735 |
II | 100U + 600TBP + 10000CO2 | 0.3193 | 0.5535 | 3.8410 |
III | 100U + 200TBP + 40000CO2 | 0.7579 | 0.9831 | 8.7793 |
IV | 100U + 600TBP + 40000CO2 | 0.5884 | 1.1091 | 7.7932 |
The speciation distribution is shown in Fig. 4, and the time 0 ns was the starting point of the production stage of simulation. It can be seen that, in different systems, the change of species with time was quite different. For the system with 600 TBP (system II and IV), the ultimate species was 1:2 species, and the condensed system IV formed 1:2 species more quickly. For the system without enough TBP, the species distribution was different. In the sparse system (system I), the 1:1 species increased first, and then decreased slowly, while for the condensed system (system III), the 1:1 species decreased continuously. Only system I had a large amount of 1:1 species after 20 ns, which was also easy to observe the poly-core uranyl species. This was also consistent with the RDF analysis. The value of RDFU⋯U at 4.5 Å in system I was the highest among the systems. We retrieved the trajectories of the poly-core formation process. The 2:3 species was formed by the collision of 1:1 and 1:2 species. At first, the interaction was established by the attraction of ONO3 in 1:2 species and U atom in 1:1 species, then a reconfiguration of the cluster and exchange of TBP molecules occurred, subsequently a stable 2:3 species formed. The 3:3 species was formed when three 1:1 species met almost in the same time. Therefore, the presence of 1:1 species was the key to the formation of poly-core species, and the side without TBP of 1:1 species had the ability to contact with other 1:1 species or 1:2 species. The system with a low TBP:U ratio and low TBP concentration produced more 1:1 species, which could further generate poly-core species.
The peak at 4.5 Å of the RDFU⋯U curve disappeared, as shown in Fig. 6. It was difficult to form the poly-core complex in the presence of water because the coordination of H2O with uranium atoms would prevent the approaching of another uranium atom. The RDF of U⋯OH2O was about 2.7 Å, and when the amount of TBP molecules was high, the peak intensity at 2.7 Å decreased, suggesting that more number of water molecules were replaced by TBP. This coincides with solvent extraction situation, that the complexation of uranyl with TBP is achieved by the replacement of the water molecules of the hydrated uranyl ions by TBP.
The speciation distribution is shown in Fig. 7. The species TBP·H2O fluctuated largely in all systems, which suggested that this species was less stable. Also, TBP·H2O decreased gradually over time when TBP was insufficient, while it remained constant in the systems with 600 TBP. [UO2(NO3)2]·2TBP species increased gradually, while [UO2(NO3)2]·2H2O and TBP·[UO2(NO3)2]·H2O increased first, and then decreased gradually, except for system V. Therefore, it is assumed that, at the beginning of the simulation, uranyl nitrate coordinated with water and TBP quickly at its two coordination sites, resulting in the formation of [UO2(NO3)2]·2H2O or TBP·[UO2(NO3)2]·H2O, rather than one site coordination species, [UO2(NO3)2]·H2O or TBP·[UO2(NO3)2]. Moreover, excess water molecules complexed with TBP, forming TBP·H2O species. Then, the thermodynamically stable species [UO2(NO3)2]·2TBP developed gradually, and kinetically favoured species decreased accordingly. We also compared system V and VII. Because the TBP was not sufficient in system V, TBP·H2O species decreased, suggesting that TBP·H2O species would dissociate, and that the released TBP molecules were captured by uranyl nitrate or uranyl complex. There was a clear tendency that TBP·[UO2(NO3)2]·H2O species converted into [UO2(NO3)2]·2TBP species. As shown by systems VI, VII and VIII, when the amount of [UO2(NO3)2]·2H2O was already very low, the number of TBP·[UO2(NO3)2]·H2O molecules decreased, while that of [UO2(NO3)2]·2TBP increased. An exception was noticed in system V, in which the amount of TBP·[UO2(NO3)2]·H2O remained constant in the closure of simulation because of the low density of free TBP; this suggested that free TBP is needed for the conversion reaction to occur. As for the system with 600 TBP, the number of [UO2(NO3)2]·2TBP at 20 ns was much higher, and even when there were free TBP, the TBP·[UO2(NO3)2]·H2O species still coexisted.
Fig. 8 Complexation at the interface of anhydrate uranyl nitrate/supercritical CO2 (CO2 was hidden for clarity). |
As for the system of hydrated uranyl nitrate, uranyl nitrate and water molecules were packed in a layer of 25 Å thickness. After heated at 700 K, some uranyl nitrate and water entered the supercritical CO2 phase. The solid layer remained aggregated at the stage of production simulation. Also, more TBP aggregated at the surface of the solid phase, further reducing the concentration of TBP in the supercritical phase. In the bulk of the supercritical phase, the species were similar to that of the perfect mixing system containing water. No poly-core species was formed. Presumably, when the solid phase was “disturbed” by heating, the uranyl nitrate and water entered the supercritical CO2 phase simultaneously, holding a proportion consistent with the solid phase.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/d1ra06512b |
This journal is © The Royal Society of Chemistry 2021 |