Ana Carolina
Yamakawa
*a,
Caroline Rodrigues
Basso
ab,
Valber de Albuquerque
Pedrosa
b and
João Pessoa
Araújo Júnior
*ab
aBiotechnology Institute, São Paulo State University, Botucatu, SP 18607-440, Brazil. E-mail: a.yamakawa@unesp.br; joao.pessoa@unesp.br
bChemical and Biological Sciences Department, Bioscience Institute, São Paulo State University, Botucatu, SP 18618-000, Brazil
First published on 13th October 2022
Canine parvovirus 2 (CPV-2) is responsible for one of the most common gastrointestinal diseases that affect mainly young dogs. This severe condition can lead to death, and the development of low-cost and fast diagnostic techniques is essential since only clinical diagnosis is not accurate. Furthermore, noble metal nanoparticles, such as gold nanoparticles (AuNPs), have dynamic physicochemical characteristics that allow the transduction of various signals, which makes them efficient biosensors. The present report describes a protocol to identify CPV-2 from stool samples using AuNPs modified with antibody deposition. The protocol was standardized using monoclonal and polyclonal antibodies, and a combination of both. A total of 60 positive and five negative stool samples for CPV-2 were subjected to the technique. There was a significant increase in wavelengths after the addition of the positive samples. The combination of both antibodies showed the greatest difference. In contrast, when adding the negative samples, there was no statistically significant difference in wavelengths compared to that in the step with the antibodies. Adenovirus and porcine circovirus 2 samples were also subjected to the technique, and no nonspecific binding was detected. This technique provides a quick (40 min), low cost ($2 per sample), and sensitive and specific diagnosis. The results found here are promising and may serve as a basis for future point of care testing AuNP protocols.
CPV-2 is one of the most important enteric pathogens in dogs, especially in high canine density populations such as in kennels and shelters.9 Characterized as an acute infectious disease, faecal–oronasal contact is the main transmission route with a significant spread rate.1,10,11 After oronasal contact, CPV-2 can replicate on cells in the dividing phase, especially on gastrointestinal and lymphoid tissue.1 Thus, infection of leucocytes and then the crypt cells of the small intestine leads to shortening and even necrosis.1 Along with these effects, they can induce severe gastrointestinal signs such as haemorrhagic diarrhoea, especially for puppies, and may lead to sepsis with high mortality rates.12,13
There are some available diagnosis techniques for CPV-2 identification from biological samples.9 The gold standard diagnosis uses molecular techniques, such as qPCR.9,14 Likewise, we can detect CPV-2 by viral isolation with cell culture,15,16 transmission electron microscopy,17 hemagglutination tests,18 and ELISA and immunochromatographic tests (IC).19–21 However, they can be expensive and time-consuming techniques.
Nanotechnology has been growing as a focus of research in the areas of biology and medicine since the beginning of the 21st century, due to the ability to manipulate the physical, chemical, and biological characteristics of nanoparticles.22 Biosensors use biological materials such as enzymes, antibodies, nucleic acids, and aptamers, among others, which, when connected to a transducer, will transform the target into an electrical, optical, gravimetric, or thermal signal that can be measurable for reading.23–25 Furthermore, the versatility in diagnostic tests has been proving advantageous for rapid and real-time analysis of in vivo samples.26,27
The use of gold nanoparticles (AuNPs) as biosensors has been gaining attention, already being reported in the detection of pesticides, hormones, viruses, and bacteria.23,28–34 Due to their unique characteristics, such as high biocompatibility, easy functionalization with proteins, and optical and electronic properties, they are ideal to produce analysis protocols.35–37
Another important property that allows the use of AuNPs in different biomedical applications is their scattering and absorption of light in the visible region by the oscillation of free electrons on their surface, an event known as localized surface plasmon resonance (LSPR).38 This resonance is directly affected by the size and shape of the AuNPs and can be assessed by the wavelength of the solution.38 Consequently, the deposition of biomolecules in AuNPs affects their resonance, and consequently their wavelength, and it is possible to follow their changes by the LSPR technique.39 Therefore, this report proposes a parvovirus detection protocol using AuNPs and LSPR analyses to establish a fast, accurate and inexpensive diagnosis.
CPV-2 presence in the feces was confirmed by a quantitative polymerase chain reaction (qPCR), the gold standard diagnosis. DNA extraction was performed with an adapted protocol using magnetic beads (Sera-Mag™ Magnetic SpeedBeads™ Carboxylate-Modified Dia.: 1 μm; 3 EDAC/PA5; 15 mL) (GE Healthcare, Chicago, Illinois, EUA).40 For the reaction, 10 μL of GoTaq® qPCR Master Mix (Promega, Madison, USA) was used, along with 0.8 μL of each specific primer14 (10 pmol μL−1) and 4.4 μL nuclease-free water. The cycling consisted of five minutes of 95 °C denaturation, followed by 40 cycles of 95 °C per 15 seconds and 60 °C per minute, and a melting curve. The reaction was conducted on an AriaMX real-time PCR System (Agilent, Santa Clara, CA, EUA). All reactions were performed with nuclease-free water as negative control and a previous positive control.
Hemagglutination tests (HA) to determine the viral titer were performed using fresh swine blood as previously described.18 The feces were serially diluted in borate buffer (pH 8.7) with a factor of two and starting on a 1:20 dilution.
Next-generation sequencing of seven samples was also performed to identify the antigenic variants (CPV-2a, CPV-2b, and CPV-2c). A library was prepared with an Illumina DNA Prep kit (Illumina Inc., CA, USA) and a pool of all samples was processed on a 300 cycle micro flow cell on a MiSeq equipment (Illumina Inc., CA, USA). The sequences were analysed with the software Geneious Prime (Biomatters, Auckland, New Zealand) and aligned to a reference sequence of the CPV-2 complete genome (GenBank NC_001539.1).
Self-assembled monolayers (SAMs) were arranged by the addition of 100 μL of 11-mercaptoundecanoic acid (MUA) (0.018 M) in 1 mL of AuNPs, followed by a 40 minute incubation. The thiol group present in MUA binds irreversibly to the AuNP structure. Then, 50 μL of 0.1 M N-(3-dimethylaminopropyl)-N′-ethylcarbodiimide hydrochloride (EDC) and 0.05 M N-hydroxysuccinimide (NHS) were added, followed by a 4 °C overnight incubation. The SAMs are responsible for mediating the attachment of the antibodies under the gold nanoparticles, through the interaction of their non-active functional group with the thiol group of the monolayer. To characterize the SAM and AuNP complex, the LSPR and TEM techniques were performed.
To evaluate the technique specificity and selectivity, biological samples containing porcine circovirus 2 (stool and serum) and a porcine adenovirus (serum) were also tested. The families Circoviridae and Adenoviridae were preferred since they have similarities to the family Parvoviridae, like the absence of a viral envelope.2,42,43 In addition, the Circoviridae and Parvoviridae families also present a round capsid with a T = 1 icosahedral symmetry, besides having a similar size (around 18 nm) and ssDNA.2,42
Fig. 1 AuNP characterization. A) UV-vis spectra of AuNPs synthesized and the formation of the self-organized monolayers. B) DLS graphical analysis of AuNP size and polydispersity. |
The DLS analysis was also satisfactory. In Fig. 1B, we can observe that the AuNPs presented an average radius and diameter of 11.5 and 23 nm, respectively, with a polydispersity index (PDI) of 0.48. The PDI represents the size heterogeneity within a sample, with the higher the index, the greater the size variation. Previous studies found similar PDI values in experiments with AuNPs.45,46
Analysis of the TEM images corroborate the spectrophotometry and DLS results, about the success of synthesis and diameter of AuNPs, respectively. In Fig. S1A and B,† it is possible to observe the TEM image and histogram of the diameter distribution of AuNPs, with an average diameter of 23.64 nm ± 5.41 nm, agreeing with the value found by DLS of 23 nm.
Fig. 2 UV-vis spectrum plots of monoclonal antibodies at different concentrations (0.5, 1.5, 2 and 2.5 μg mL−1) diluted in PBS. |
The binding of the amine groups of the polyclonal antibodies present in the hyperimmune serum with the N-hydroxysuccinimide groups was tested with pure serum and that diluted at 1:10, 1:100, 1:200, and 1:400 in PBS. The 1:100 dilution was the most satisfactory, showing an increase in wavelength compared to that in the EDC/NHS step with less noise, as shown in the graphs present in Fig. 3.
Fig. 3 UV-vis spectrum plots of the polyclonal antibodies with different dilutions (pure, 1:10, 1:100, 1:200, and 1:400) in PBS. |
To exclude possible nonspecific interactions with bacteria, proteins, and/or salts present in the stool, five CPV-2 negative stool samples were diluted in PBS (pH 7.4) at the ratios 1:10, 1:100, 1:150, 1:200, 1:500, and 1:1000. The monoclonal and polyclonal antibodies, and the combination of both antibodies, have not presented any nonspecific interactions at 1:150 dilution as presented in Fig. 4. As presented in Fig. 4A, the monoclonal antibodies presented a wavelength of 531.25 nm, and after the addition of the negatives 1 and 2, and only PBS, the wavelength became 529.34 nm, 529.24 nm, and 530.16 nm, respectively. In Fig. 4B, we have the polyclonal antibody wavelength values, being 532.41 nm and 531.58 nm after the addition of negative 1, 529.82 nm after adding negative 2, and 530.07 nm for the PBS only. The combination of both immunoglobulins is represented in Fig. 4C, with a wavelength of 531.26 nm, and after the addition of negatives 1 and 2, and PBS, it became 528.42 nm, 530.49 nm, and 528.98 nm, respectively. Therefore, the experiments with all positive and negative samples were performed at 1:150 dilution in PBS.
Further, the UV-vis spectrophotometry analyses confirmed the viral binding in the AuNP complex by the positive sample wavelength increase, as shown in Fig. 6. In Table S1,† we have the wavelength values of the positive and negative samples, and the respective differences compared to that in the antibody step. Regarding the detection of the three antigenic variants (PVC-2a, PVC-2b, and PVC-2c), the protocol was also proved satisfactory. The three variants PVC-2a (A20), PVC-2b (A8, A21, A29, and A30), and PCV-2c (A5 and A12) all showed an increase in their wavelengths compared to the respective immunoglobulin steps, as presented in Table S1.†
The mean wavelength after binding of the monoclonal antibodies in the complex was 531.1 ± 0.16 nm (95% CI, 531.1–531.2), the polyclonal antibodies showed a mean of 532.8 ± 0.43 nm (95% Cl, 532.7–532.9) and the combination of both in a 1:1 ratio showed a mean of 532.2 ± 0.76 nm (95% IC, 532–532.4). The wavelength after the addition of the positive samples and incubation showed a mean of 537.2 ± 4.46 nm (95% IC, 536.1–538.4) with the use of monoclonal immunoglobulin, with polyclonal immunoglobulin, the mean was 536.9 ± 2.21 nm (95% IC, 536.3–537.5) and the combination of both showed the highest mean with 538.4 ± 3.73 nm (95% IC, 537.4–539.4).
Regarding the addition of the negative samples in the complex with the monoclonal antibodies, the mean wavelength of the samples was 529.9 ± 0.85 nm (95% IC, 528.8–530.9), with the polyclonal antibodies, the mean was 531.2 ± 0.87 nm (95% IC, 530.1–532.2) and using the combination of both showed a mean of 529.8 ± 0.97 nm (95% IC, 528.6–531).
The difference between the immunoglobulin's wavelength and that after the addition of positive samples had a mean increase of 6.05 ± 4.43 nm (95% IC, 4.91–7.2; p < 0.0001) with the monoclonal antibodies and 4.07 ± 2.02 nm (95% IC, 3.55–4.59; p < 0.0001) with the polyclonal antibodies, and the combination of both presented a mean increase of 6.21 ± 3.59 nm (95% IC, 5.29–7.14; p < 0.0001). The three groups showed a statistically significant wavelength increase compared to those in the previous step. However, the combination of monoclonal and polyclonal antibodies obtained the greatest difference. Furthermore, the use of monoclonal antibodies and the combination of monoclonal and polyclonal antibodies showed a statistically significant difference compared to that of polyclonal antibodies (p = 0.014 and p = 0.0002, respectively). However, the use of the monoclonal antibodies and the combination of both antibodies had no statistical difference (p = 0.706).
Regarding the negative samples, there was no increase in the wavelength compared to the AuNPs@MUA@EDC/NHS@Immunoglobulin step for all groups. With the monoclonal antibodies, the mean difference was −1.32 ± 0.88 nm (95% IC, −2.42–−0.23; p = 0.0625), that with the polyclonal antibodies was −1.29 ± 0.85 nm (95% IC, −2.3–−0.24; p = 0.0625) and that with the combination of both was −1.55 ± 0.94 nm (95% IC, −2.71–−0.38; p = 0.0625). No statistical difference was found between the wavelengths of the negative samples with the immunoglobulins. Regardless of the antibody, all negative samples showed a lower wavelength compared to those in the previous step, and similar results to those found in previous studies.23,29,30 The difference between the median wavelengths of the positive and negative samples are proved statistically significant with p < 0.0001, for all antibodies (monoclonal, polyclonal, and combination).
The TEM analysis corroborates the UV-visible results. In Fig. S3A,† an increase in the average diameter of the AuNPs is noticed, previously from 23.64 nm to 29.24 nm after the formation of the complex AuNPs@MUA@EDC/NHS@Immunoglobulins. After the addition of a positive sample, an increase in the average diameter to 32.73 nm is observed (Fig. S3B†). Similar results were found in previous experiments,30,47 demonstrating an increase in the diameter of AuNPs from biomolecule deposition.
In Fig. S4,† we have TEM images, where we can observe, in Fig. S4A,† the AuNPs at a 500 nm scale with a uniform size and dispersed. In Fig. S4B,† we have the formation of a monolayer around the AuNPs and in Fig. S4C,† the complex with the binding of the combination of monoclonal and polyclonal antibodies. Further, in Fig. S4D,† we have the addition of a positive sample, and it is possible to observe a subtle shadow around the AuNPs and an increase in the nanoparticle aggregates. The results are similar to those of previous studies with AuNPs.30,48
Fig. 7 Protocol limit of detection. A. UV-vis graphs of diluted sample 12. B. Comparison between the wavelength values and log2 of the respective dilutions. |
To evaluate the selectivity of the protocol, serum samples positive for adenovirus and porcine circovirus 2 (PCV-2) and one stool sample positive for PCV-2 were subjected to the technique. Both viral families, Adenoviridae and Circoviridae, comprise DNA viruses with the absence of a viral envelope, similar to parvoviruses.2,42,43 In Fig. 8, we have the UV-vis analysis for evaluation of possible cross-linking with other viral samples. The step with the combination of both antibodies showed a wavelength of 531.89 nm, which, with the addition of the adenovirus and CVS-2 serum sample, changed to −1.43 and −2.92 nm, respectively. The PCV-2 stool sample also showed a wavelength reduction of −2.23 nm, as well as with the addition of PBS (−3.92 nm). No nonspecific binding of the AuNP complex to the parvovirus-like viral samples was evident.
Fig. 8 UV-vis analysis of the AuNPs with complexes and after addition of positive, negative, PBS and interfering samples. |
The use of AuNPs for diagnostic methods has already been proven advantageous and effective, with a combination of low cost, ease of conjugation, and unique optical properties.23,29 The use of AuNPs as biosensors to detect CPV-2 by LSPR analysis proved to be a fast, reliable, and inexpensive technique compared to the gold standard test qPCR. Here in the protocol, there is no necessity for previous steps, such as DNA extraction,14 which can delay and increase the diagnosis cost.
The combination of monoclonal and polyclonal antibodies showed a more satisfactory result, especially when compared to the use of the polyclonal antibodies alone. It was possible to detect the three variants using the protocol, without cross-referencing with other similar viral samples, demonstrating the satisfactory selectivity of the immunosensor. Furthermore, the sensitivity was confirmed to be remarkable when compared to the qPCR results, and all the 60 CPV-2 positive samples presented an increase in the wavelength. Similar results were found in previous experiments performed by our research group for dengue virus detection using AuNPs.29
Despite the absence of an association of the wavelength value with the viral concentration in the biological sample, for canine parvovirus, only qualitative diagnosis (positive or negative) is enough to continue the treatment and subsequent outbreak control.
The protocol also proved to be more financially advantageous and fast, with an execution time of approximately 40 minutes. With the reagents used, the cost was around USD 2.00 per sample, which is more affordable compared to molecular methods and fast diagnostic kits available.
Some technique limitations are that LSPR can have less efficient and sensitive results in comparison to the conventional surface plasmon resonance (SPR) and surface-enhanced Raman scattering (SERS), due to interferences in the peak shape from a diversity of parameters (shape, size, medium/solution).25,49–51 However, LSPR has advantages as well, such as the possibility of NP solutions being easy and practical to transport around locations. Further, LSPR usage with metallic nanoparticles in the detection of several compounds is widely described in the literature as reported by Basso et al.,28–30,44 which can be measured on an ultraviolet-visible (UV-vis) spectrophotometer showing results with higher sensitivity and lower detection limits, due to collective interactions between NPs, altering the optical response of the overall NP assembly.
To date, there have been no studies in the literature using AuNPs in solution with the LSPR technique for CPV-2 diagnosis. This new methodology involves low cost, easy manipulation, and simple operational procedures with good bioconjugation yield. Along with the potential to be used as an alternative to traditional detection tests, the methodology can also be a start to establishing a point of care testing diagnosis as well. Besides, AuNP diagnostic techniques already have been related to fast colorimetric diagnostic protocols;30,34,44,52–55 the present experiments did not have a colorimetric change after virus binding on the AuNP complex, similar to a previous report on dengue virus detection.29 However, when the AuNPs were combined with surface active maghemite nanoparticles and specific aptamers, a colorimetric change was observed.44 AuNP use in immunochromatographic (IC) strips, also known as lateral flow assays, is another possibility.46,55 Most IC commercial tests are based on the use of only one or two monoclonal antibodies (capture and detection).46 A previous immunochromatographic strip test study, using a monoclonal antibody specific to CPV-2 as a detection antibody and a polyclonal antibody as capture antibody, has established a high specificity protocol.46 Further, the combined use of monoclonal and polyclonal antibodies as detectors in IC tests may increase the sensitivity and reduce the costs, since polyclonal antibodies are less expensive. Accordingly, the results herein can benefit and give guidance to a future point of care testing protocol using AuNPs combining monoclonal and polyclonal antibodies.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d2sd00114d |
This journal is © The Royal Society of Chemistry 2023 |