DOI:
10.1039/D4DD90020K
(Correction)
Digital Discovery, 2024,
3, 1069-1070
Correction: Predicting small molecules solubility on endpoint devices using deep ensemble neural networks
Received
25th April 2024
, Accepted 25th April 2024
First published on 3rd May 2024
Abstract
Correction for ‘Predicting small molecules solubility on endpoint devices using deep ensemble neural networks’ by Mayk Caldas Ramos and Andrew D. White, Digital Discovery, 2024, 3, 786–795, https://doi.org/10.1039/D3DD00217A.
The header row in Table 2 is incorrect. The correct version of Table 2 is displayed below. Please note that the references are reproduced here as ref. 1–13.
Table 2 Metrics for the best models found in the current study (upper section) and for other state-of-the-art models available in the literature (lower section). Values were taken from the cited references. Missing values stand for entries that the cited authors did not study. SolChal columns stand for the solubility challenges. 2_1 represents the tight dataset (set-1), while 2_2 represents the loose dataset (set-2) as described in the original paper (see ref. 1). The best-performing metrics value are displayed in bold
Model |
SolChal1 |
SolChal2_1 |
SolChal2_2 |
ESOL |
RMSE |
MAE |
RMSE |
MAE |
RMSE |
MAE |
RMSE |
MAE |
Has overlap between training and test sets.
Pre-trained model was fine-tuned on ESOL.
|
RF |
1.121 |
0.914 |
0.950
|
0.727
|
1.205
|
1.002
|
|
|
DNN |
1.540 |
1.214 |
1.315 |
1.035 |
1.879 |
1.381 |
|
|
DNNAug |
1.261 |
1.007 |
1.371 |
1.085 |
2.189 |
1.710 |
|
|
kde4LSTMAug |
1.273 |
0.984 |
1.137 |
0.932 |
1.511 |
1.128 |
1.397 |
1.131 |
kde8LSTMAug |
1.247 |
0.984 |
1.044 |
0.846 |
1.418 |
1.118 |
1.676 |
1.339 |
kde10LSTMAug |
1.095
|
0.843
|
0.983 |
0.793 |
1.263 |
1.051 |
1.316
|
1.089
|
Linear regression2 |
|
|
|
|
|
|
0.75 |
|
UG-RNN3 |
0.90 |
0.74 |
|
|
|
|
|
|
RF w/CDF descriptors4 |
0.93 |
|
|
|
|
|
|
|
RF w/Morgan fingerprints5 |
|
0.64
|
|
|
|
|
|
|
Consensus6 |
0.91
|
|
|
|
|
|
|
|
GNN7 |
∼1.10 |
|
0.91
|
|
1.17
|
|
|
|
SolvBert8 |
0.925 |
|
|
|
|
|
|
|
SolTranNeta,9 |
|
|
1.004 |
|
1.295 |
|
2.99 |
|
SMILES-BERTb,10 |
|
|
|
|
|
|
0.47 |
|
MolBERTb,11 |
|
|
|
|
|
|
0.531 |
|
RTb,12 |
|
|
|
|
|
|
0.73 |
|
MolFormerb,13 |
|
|
|
|
|
|
0.278
|
|
The Royal Society of Chemistry apologises for these errors and any consequent inconvenience to authors and readers.
References
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