Themed collection MSDE Open Access Spotlight

30 items
Open Access Review Article

Re-engineering luminol: new frontiers in chemiluminescence chemistry

Luminol and its derivatives have emerged as powerful chemiluminescent agents with broad applications in biomedical diagnostics, forensic science, and environmental monitoring.

Graphical abstract: Re-engineering luminol: new frontiers in chemiluminescence chemistry
Open Access Review Article

Toward understanding biomolecular materials comprising intrinsically disordered proteins via simulation and experiment

Different simulation approaches have been applied to understanding and predicting key features of the solution behavior of intrinsically disordered proteins.

Graphical abstract: Toward understanding biomolecular materials comprising intrinsically disordered proteins via simulation and experiment
Open Access Communication

Is DFT enough? Towards accurate high-throughput computational screening of azobenzenes for molecular solar thermal applications

We present an accurate and efficient screening protocol for azobenzene derivatives for Molecular Solar Thermal (MOST) applications based on ground state properties.

Graphical abstract: Is DFT enough? Towards accurate high-throughput computational screening of azobenzenes for molecular solar thermal applications
From the themed collection: MSDE Open Access Spotlight
Open Access Communication

Dual-labelled polymeric micelles for singlet oxygen reporting in biological systems

Dually-labelled polymeric micelles allowed tracing both the probe location and the levels of singlet oxygen (1O2) in biological systems.

Graphical abstract: Dual-labelled polymeric micelles for singlet oxygen reporting in biological systems
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Fitting a square peg in a round hole: parameterisation of quasi-spherical molecules employing the Mie potential

Apart for the case of noble gases, no single set of molecular force field parameters can simultaneously describe the fluid phase equilibria, transport, and solid transition properties of quasi-spherical molecules.

Graphical abstract: Fitting a square peg in a round hole: parameterisation of quasi-spherical molecules employing the Mie potential
Open Access Paper

Origins of curvature in meso-tetra(4-sulfonatophenyl) porphine aggregation: molecular dynamics and electronic spectroscopy

We extended GAFF parameters for porphyrin macrocycles and obtained TPPS4 tetramers trajectories, which shows the emergence of global tetramer structure curling.

Graphical abstract: Origins of curvature in meso-tetra(4-sulfonatophenyl) porphine aggregation: molecular dynamics and electronic spectroscopy
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Harnessing peptide–cellulose interactions to tailor the performance of self-assembled, injectable hydrogels

Peptide–polyurea (PPU)/cellulose nanocrystal (CNC) nanocomposites demonstrate hierarchical assembly into non-covalent hydrogels with tunable strength and rapid shear recovery.

Graphical abstract: Harnessing peptide–cellulose interactions to tailor the performance of self-assembled, injectable hydrogels
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Computational screening analysis of iron zeolites for selectively capturing NOx and CO over H2O and CO2

Unlocking the selective adsorption of NO, NO2 and CO in the presence of H2O and CO2 using iron zeolites: a systematic DFT screening of key questions and properties.

Graphical abstract: Computational screening analysis of iron zeolites for selectively capturing NOx and CO over H2O and CO2
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Grain boundaries in periodic vs. in aperiodic crystals composed of colloids with preferred binding angles

Grain boundaries for systems composed of patchy colloids with a periodic order and in aperiodic structures.

Graphical abstract: Grain boundaries in periodic vs. in aperiodic crystals composed of colloids with preferred binding angles
Open Access Paper

DynaMate: leveraging AI-agents for customized research workflows

Developments related to large language models (LLMs) have deeply impacted everyday activities and offer the potential to automate complex research workflows involving repetitive and time-consuming tasks. The presented template enables the rapid incorporation of custom tools with LLM agents.

Graphical abstract: DynaMate: leveraging AI-agents for customized research workflows
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Elucidating the role of charge transfer on semiconductor properties in a new donor–acceptor cocrystal 1,5-dihydroxynaphthalene : TCNQ

In this work, we have investigated the semiconducting properties of an unprecedented 1 : 1 π-stacked donor–acceptor cocrystal of 1,5-dihydroxynaphthalene (DHN) as the π-donor (D) with 7,7′,8,8′-tetracyanoquinodimethane (TCNQ) as the π-acceptor (A).

Graphical abstract: Elucidating the role of charge transfer on semiconductor properties in a new donor–acceptor cocrystal 1,5-dihydroxynaphthalene : TCNQ
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Vasoactive intestinal peptide amphiphile micelle material properties influence their cell association and internalization

Self-assembled peptide amphiphile micelles act as nanostructured, modular drug delivery vehicles whose architectures can be tuned for efficient transport of therapeutic peptides for a multitude of applications.

Graphical abstract: Vasoactive intestinal peptide amphiphile micelle material properties influence their cell association and internalization
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Enhanced thermal response of 3D-printed bilayer hydrogels via nanoclay incorporation

Nanoclay enhances the actuation of thermally-responsive 3D-printed hydrogel bilayers.

Graphical abstract: Enhanced thermal response of 3D-printed bilayer hydrogels via nanoclay incorporation
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Quantum chemical screening of eutectic solvent components for insights into CO2 complexation mechanisms

Different eutectic solvent components are simulated to understand the thermodynamics associated with the different, potential CO2 complexation pathways.

Graphical abstract: Quantum chemical screening of eutectic solvent components for insights into CO2 complexation mechanisms
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Construction of an organic cage-based porous ionic liquid using an aminal tying strategy

An organic cage-based porous ionic liquid (PIL) was constructed by functionalising a reduced cage core with ionic liquid functionality. The resulting PIL displayed melting behaviour, a glass phase, enhanced CO2 uptake and permanent porosity.

Graphical abstract: Construction of an organic cage-based porous ionic liquid using an aminal tying strategy
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Transfer learning accelerated discovery of conjugated oligomers for advanced organic photovoltaics

Transfer learning followed by density functional theory accelerates material discovery of conjugated oligomers for high-efficiency organic photovoltaic materials.

Graphical abstract: Transfer learning accelerated discovery of conjugated oligomers for advanced organic photovoltaics
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Mesoscale modelling of polymer-mediated adhesion: application to tack tests

Computational models of polymer adhesion reveal how pulling speed, interfacial kinetics and detachment mechanisms influence performance.

Graphical abstract: Mesoscale modelling of polymer-mediated adhesion: application to tack tests
Open Access Paper

Expediting field-effect transistor chemical sensor design with neuromorphic spiking graph neural networks

Improving the sensitive and selective detection of analytes in a variety of applications requires accelerating the rational design of field-effect transistor (FET) chemical sensors.

Graphical abstract: Expediting field-effect transistor chemical sensor design with neuromorphic spiking graph neural networks
Open Access Paper

Investigating structural biophysical features for antigen-binding fragment crystallization via machine learning

Crystal-site and non-crystal-site residues in crystal interfaces are classified using machine learning and in silico modeling to identify key structural physicochemical features influencing fragment antigen-binding (Fab) crystallization.

Graphical abstract: Investigating structural biophysical features for antigen-binding fragment crystallization via machine learning
Open Access Paper

A bio-inspired approach to engineering water-responsive, mechanically-adaptive materials

This paper highlights a bioinspired approach to engineering water-responsive materials via a diverse array of self-assembled nanostructures.

Graphical abstract: A bio-inspired approach to engineering water-responsive, mechanically-adaptive materials
Open Access Paper

Reweighting configurations generated by transferable, machine learned models for protein sidechain backmapping

Backmappings of protein sidechains exposing exact probability densities of generated configurations enable reweighting with protein force fields. Though trained models produce low-energy configurations, reweighting remains unexpectedly challenging.

Graphical abstract: Reweighting configurations generated by transferable, machine learned models for protein sidechain backmapping
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Molecular analysis and design using generative artificial intelligence via multi-agent modeling

We report the use of a multiagent generative artificial intelligence framework, the X-LoRA-Gemma large language model (LLM), to analyze, design and test molecular design.

Graphical abstract: Molecular analysis and design using generative artificial intelligence via multi-agent modeling
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Nanostructured liquid-crystalline ion conductors based on linear carbonate moieties: effects of oligooxyethylene and alkylene spacers on self-assembled properties and ionic conductivities

Ion-conductive 2D nanostructured liquid crystals containing linear carbonate moieties are developed. The complexes of these materials with lithium salts may have potential as self-assembled electrolytes in lithium-ion batteries.

Graphical abstract: Nanostructured liquid-crystalline ion conductors based on linear carbonate moieties: effects of oligooxyethylene and alkylene spacers on self-assembled properties and ionic conductivities
Open Access Paper

Process-based screening of porous materials for vacuum swing adsorption based on 1D classical density functional theory and PC-SAFT

Integrating a thermodynamic model for solid–fluid interactions into a process model to screen nanoporous materials for carbon capture.

Graphical abstract: Process-based screening of porous materials for vacuum swing adsorption based on 1D classical density functional theory and PC-SAFT
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Understanding stable adsorption states in flexible soft porous coordination polymers through free energy profiles

Soft porous coordination polymers show metastable states in volume while varying loading. The flexibility of the linkers affects the resulting configurations.

Graphical abstract: Understanding stable adsorption states in flexible soft porous coordination polymers through free energy profiles
Open Access Paper

PepMNet: a hybrid deep learning model for predicting peptide properties using hierarchical graph representations

Peptides are a powerful class of molecules that can be applied to a range of problems including biomaterials development and drug design.

Graphical abstract: PepMNet: a hybrid deep learning model for predicting peptide properties using hierarchical graph representations
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Investigating the design of macromolecular-based inks for two-photon 3D laser printing

The relationship between the design of macromolecular inks and material properties of two-photon 3D laser printed structures is investigated.

Graphical abstract: Investigating the design of macromolecular-based inks for two-photon 3D laser printing
From the themed collection: MSDE Open Access Spotlight
Open Access Paper

Accelerating multicomponent phase-coexistence calculations with physics-informed neural networks

We develop a physics-informed machine learning workflow that accelerates multicomponent phase-coexistence calculations on the number, composition, and abundance of phases. The workflow is demonstrated for systems described by Flory–Huggins theory.

Graphical abstract: Accelerating multicomponent phase-coexistence calculations with physics-informed neural networks
Open Access Paper

DORA-XGB: an improved enzymatic reaction feasibility classifier trained using a novel synthetic data approach

We outline a method for synthetically generating negative data by considering alternative reaction centers on small-molecule substrates that are known to participate in enzymatic reactions.

Graphical abstract: DORA-XGB: an improved enzymatic reaction feasibility classifier trained using a novel synthetic data approach
Open Access Paper

Enhanced glucose-responsivity of PBA–diol hydrogel networks by reducing crosslink affinity

New diol chemistries are explored for insulin delivery from glucose-responsive hydrogels comprised of dynamic-covalent crosslinking interactions between phenylboronic acids and diols.

Graphical abstract: Enhanced glucose-responsivity of PBA–diol hydrogel networks by reducing crosslink affinity
From the themed collection: MSDE Open Access Spotlight
30 items

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