Dilip K.
Pandey
ab,
Shidheshwar B.
Ankade
ab,
Abad
Ali
a,
C. P.
Vinod
c and
Benudhar
Punji
*ab
aOrganometallic Synthesis and Catalysis Group, Chemical Engineering Division, CSIR–National Chemical Laboratory (CSIR–NCL), Dr. Homi Bhabha Road, Pune 411 008, Maharashtra, India. E-mail: b.punji@ncl.res.in
bAcademy of Scientific and Innovative Research (AcSIR), CSIR–NCL, Dr. Homi Bhabha Road, Pune, India
cCatalysis Division, CSIR–NCL, Dr. Homi Bhabha Road, Pune, India
First published on 19th August 2019
A mild and efficient nickel-catalyzed method for the coupling of unactivated primary and secondary alkyl chlorides with the C–H bond of indoles and pyrroles is described which demonstrates a high level of chemo and regioselectivity. The reaction tolerates numerous functionalities, such as halide, alkenyl, alkynyl, ether, thioether, furanyl, pyrrolyl, indolyl and carbazolyl groups including acyclic and cyclic alkyls under the reaction conditions. Mechanistic investigation highlights that the alkylation proceeds through a single-electron transfer (SET) process with Ni(I)-species being the active catalyst. Overall, the alkylation follows a Ni(I)/Ni(III) pathway involving the rate-influencing two-step single-electron oxidative addition of alkyl chlorides.
Although the C-3 alkylation of indoles can be achieved by catalytic Friedel–Crafts alkylation, allylic alkylation, and conjugate addition,5 the regioselective direct C(2)–H alkylation of indoles with alkyl halides is extremely limited.6 For example, Bach has demonstrated the C-2 alkylation of indoles with alkyl bromides via a norbornene-mediated Catellani-type reaction,7 using a high loading of the precious Pd-catalyst. In contrast, nickel-catalyzed alkylation of indoles using alkyl iodides was demonstrated by us,8 wherein a high reaction temperature (150 °C) is essential for successful reaction.
Surprisingly, to date, the selective alkylation of indoles and other related arenes has primarily been achieved by employing reactive alkyl iodides or bromides.9 However, the attempt to use high-demand and inexpensive alkyl chlorides has been less successful.10 Therefore, a generalized protocol for the direct C-2 alkylation of privileged indoles and related heteroarenes using readily available, inexpensive and challenging alkyl chlorides under mild conditions is highly desirable. Herein, we report the first general method for the coupling of unactivated alkyl chlorides with the C–H bond of indoles and pyrroles using a naturally abundant and inexpensive Ni(II)-catalyst at 60 °C. Notable aspects of this work include (i) mild and efficient C–H alkylation of indoles and pyrroles, (ii) ample scope with challenging alkyl chlorides with a high degree of tolerance in functionality, (iii) exceptional chemo and regioselectivity for C–halide activation, and (iv) mechanistic insights by detailed experimental study.
Entry | [Ni] | Ligand | t (h) | 3aa (%) |
---|---|---|---|---|
a Reaction conditions: 1a (0.039 g, 0.2 mmol), 2a (0.059 g, 0.4 mmol), [Ni] cat (0.01 mmol, 5 mol%), ligand (0.01 mmol, 5 mol%), LiHMDS (0.067 g, 0.4 mmol). b 1H NMR yield using CH2Br2 as the internal standard. c Isolated yield. d Reaction performed at 50 °C. e Without LiHMDS. LiHMDS = lithium bis(trimethylsilyl)amide, (LiN(SiMe3)2); dme = 1,2-dimethoxyethane, phen = 1,10-phenanthroline, and bpy = 2,2′-bipyridine. | ||||
1 | Ni(OAc)2 | phen | 24 | 17 |
2 | (CH3CN)2NiBr2 | phen | 24 | 38 |
3 | Ni(OTf)2 | phen | 24 | 82 |
4 | (dme)NiCl2 | phen | 24 | 72 |
5 | (thf)2NiBr2 | phen | 24 | 86 |
6 | (thf)2NiBr2 | bpy | 24 | 92 |
7 | (thf)2NiBr2 | dtBu-bpy | 24 | 87 |
8 | (thf)2NiBr2 | Neocuprine | 24 | 90 |
9 | (thf)2NiBr2 | bpy | 5 | 92 (88)c |
10d | (thf)2NiBr2 | bpy | 12 | 57 |
11 | (bpy)NiBr2 | — | 5 | 15 |
12 | (bpy)NiBr2 | — | 16 | 86 |
13 | (bpy)3Ni·NiBr4 | — | 5 | 52 |
14 | (bpy)3Ni·NiBr4 | — | 16 | 86 |
15e | (thf)2NiBr2 | bpy | 5 | — |
16 | — | bpy | 5 | — |
Upon achieving the C-2 alkylation of indoles using an inexpensive (thf)2NiBr2/bpy catalyst under mild conditions, we explored the scope of the reaction with a variety of simple and functionalized alkyl chlorides (Scheme 1). Alkyl chlorides with different chain lengths or branching were efficiently coupled, and the reaction proceeded smoothly at 60 °C affording good to excellent yields of the products 3aa–3ag. Similar product yields were observed in our previous protocol for the alkylation of indole, albeit using n-alkyl bromides at high reaction temperature (150 °C).8 1-Bromo-4-chlorobutane and 1-iodo-4-chlorobutane electrophiles chemoselectively reacted with indole 1a and produced 2-(4-chlorobutyl)-1-(pyridin-2-yl)-1H-indole (3ah) in good yield leaving the –Cl functionality untouched. Particularly, a low product yield was reported for the same reaction using an earlier method.8 The coupling partner 1,6-dichlorohexane efficiently reacted on one C(sp3)–Cl to give the product 3ai in 80% yield. Notably, in all these cases exclusive mono-indolation products were obtained. The coupling of C(sp3)–Br and C(sp3)–I sites in the presence of a C(sp3)–Cl bond and selective one C(sp3)–Cl coupling (in the case of 1,6-dichlorohexane) are highly significant, as the resulting products can be used for further functionalization. Aryl-substituted alkyl chlorides also smoothly coupled with indole to deliver 3aj–3am. Interestingly, the activation of the C(sp3)–Cl bond was highly selective in the presence of a C(sp2)–Cl bond (3am), and the coupling of C(sp2)–Cl with indole C(2)–H was not observed. The reaction delivered an array of 2-alkylated indoles with diverse functional groups, such as phenyl ether (3an), thioether (3ao, 3ap), ketal (3aq), silyl (3ar), alkenyl (3as) and alkynyl (3at) groups. Tolerability of such functionalities is unprecedented in this type of transformation,8 including in previous examples using precious metal catalysts. The reaction was sensitive to ester, –CN, and –NO2 functionalities, and the electrophiles containing such groups were decomposed under the reaction conditions (for details see the ESI†). Notably, the use of 6-chlorohex-1-ene as the electrophile produced 2-(cyclopentyl-methyl)-1-(pyridin-2-yl)-1H-indole (3au) in 76% yield as the major product via radical cyclization, and only a trace (9%) of the direct alkylation product, 2-(hex-5-en-1-yl)-1-(pyridin-2-yl)-1H-indole, was observed. The alkyl chlorides containing heterocycles, such as furan, pyrrole, indole, and carbazole efficiently reacted with indole and delivered the desired alkylation products (3av–3aA) in moderate to good yields. Coupling of similar electrophiles was not demonstrated in our earlier protocol.8 The observed low yield during the alkylation of indole with 9-(2-chloroethyl)-9H-carbazole (2A) arises due to the severe proto-de-alkylation of the coupling partner resulting in the formation of 9H-carbazole. Notably, in all cases, regioselective C(2)–H alkylation was realized, and neither C-3 alkylation nor C-2/C-3 double alkylation was observed, which is very crucial as electrophilic activation can further functionalize the C(3)–H bond.
Furthermore, the indoles with electron-donating and electron-withdrawing substituents at the C-5 position smoothly participated in the alkylation to deliver the products 3ba–3da and 3by in good to excellent yields (Scheme 2). The sterically hindered C-3 substituted indole (1e) could be alkylated with good activity, though the same substrate gave a very poor yield with an earlier protocol.8 In addition to indoles, the pyrrole moiety was alkylated at the C-2 position to deliver selective mono-alkylation products 3ga and 3gm. Notably, the reaction of compound 3ga with 1-chlorooctane to achieve 2,5-dialkylation was unsatisfactory and resulted in 13% conversion. Other 2-pyridinyl-substituted heteroarenes, such as 1-(pyridin-2-yl)-7-azaindole, 2-(furan-2-yl)pyridine, 2-(thiophen-2-yl)pyridine and 2-(thiophen-3-yl)pyridine, were not competent under the catalytic conditions.
The optimized reaction conditions were further explored to the coupling of secondary alkyl chlorides and bromides with indole 1a (Scheme 3). Thus, the acyclic phenyl-substituted secondary alkyl chlorides and bromides were coupled at the C-2 position of indole to afford products 5aa and 5ab in moderate to good yields. Similarly, cyclic secondary alkyl halides (4c–e) with different ring sizes were reacted to produce moderate to good yields. The electrophile 2-bromobicyclo[2.2.1]heptane (4f) gave the alkylated product 5af in 35% yield. Notably, the coupling of acyclic secondary chlorides, such as 2-chlorobutane and 2-chloropentane, was inefficient and afforded only trace amounts of the product (<5%). Furthermore, coupling was not observed with tertiary alkyl chlorides, such as tert-butyl chloride and 1-chloroadamantane.
Scheme 3 Scope for secondary alkyl halides. Yield of isolated compound. a 1H NMR yield using CH2Br2 as an internal standard. |
We have demonstrated the synthesis of symmetrical and unsymmetrical bis(indolyl)butane derivatives in a single-pot using 1-bromo-4-chlorobutane (2h) (Scheme 4). Thus, the treatment of 4.0 equiv. of indole 1a with 1-bromo-4-chlorobutane (2h, 1.0 equiv.) under standard alkylation conditions afforded symmetrical bis(indolyl)butane 3ay in 66% yield. However, unsymmetrical bis(indolyl)butane 3by was isolated in 65% yield by the sequential reaction of 1-bromo-4-chlorobutane (2h) with indoles 1a and 1b in one pot. The demonstrated protocol provided a unique approach for the synthesis of bis(indolyl)alkyl derivatives, which can be extended to the development of many other symmetrical and unsymmetrical scaffolds.
Scheme 4 In situ synthesis of bis(indolyl)butane. Conditions: (thf)2NiBr2 (0.02 mmol), bpy (0.02 mmol), toluene (2.0 mL), 60 °C, 16 h. |
We have performed a gram-scale reaction to demonstrate the practical utility of the mild nickel catalyzed alkylation protocol. Thus, the reaction of 1.0 g of 1-pyridin-2-yl-1H-indole (1a, 5.15 mmol) with 1-chlorooctane (2a, 1.53 g, 10.30 mmol), employing (thf)2NiBr2/bpy (5 mol%) in the presence of LiHMDS (1.72 g, 10.30 mmol), afforded 1.24 g of the product 3aa, which amounts to 79% yield.
Considering the importance of functionalized free N–H indoles, the removal of a 2-pyridinyl group was demonstrated. Thus, the C-2 alkylated indoles 3aa, 3am, and 3ao were treated with MeOTf followed by reaction in NaOH (2.0 M) leading to the formation of C-2 alkylated free N–H indoles 6aa, 6am, and 6ao, respectively (Scheme 5).
A standard alkylation reaction was attempted in the presence of radical scavengers, TEMPO (2.0 equiv.) and galvinoxyl (2.0 equiv.), wherein the reaction was completely inhibited (Scheme 6a). Notably, the reaction of indole 1a with 6-chlorohex-1-ene afforded 76% of 2-(cyclopentylmethyl)-1-(pyridin-2-yl)-1H-indole (3au) as a major product via radical cyclization (Scheme 6b), suggesting the involvement of an alkyl radical intermediate during the reaction.
The EPR measurement of the reaction mixture, (thf)2NiBr2, bpy and LiHMDS (60 °C, 30 min), exhibits a rhombic spectrum (g1 > g2 > g3) (Fig. 1; approximately 18% w.r.t. the external standard). The g-factor (gav = 2.201) is suggestive of the unpaired spin residing in an orbital with significant metal characteristics (most likely NiI).13 This observation highlights the feasibility of a one-electron reduction of Ni(II) to Ni(I) in the presence of LiHMDS. Notably, EPR measurements of other control experiments, including that of (thf)2NiBr2/bpy, resulted in spectra that were too complicated to make any concrete judgments on the nature of the radical species.
Product (3aa) formation during the alkylation was consistent, and the initial rate of the reaction was 7.3 × 10−4 M min−1 (Fig. S5†). The kinetic isotope effect (KIE) value of 1.12 (from independent reaction rates of 1a and [2-D]-1a) ruled out the involvement of C–H activation in the rate-limiting step (Scheme 7a).14 Furthermore, a substantial H/D exchange between indole [2-D]-1a and 5-methoxy-1-(pyridine-2-yl)-1H-indole (1c) at the C(2)–H position is indicative of reversible C–H nickelation (Scheme 7b). The attempted alkylation reaction (both in the presence and absence of (thf)2NiBr2/bpy) followed by quenching with D2O (Scheme 7c) shows no deuterium incorporation at the C(2)–H or C(3)–H of indole 1a, which ruled out a simple base-mediated deprotonation pathway. Independent rate determination highlights that the electron-rich indole promotes alkylation, thus suggesting probable rate-influencing oxidative addition (Scheme 8a).15 This finding also suggests the improbability of reductive elimination as a rate-influencing step, because reductive elimination would preferably be assisted by an electron-deficient substituent on the substrate. Notably, 1-iodooctane and 1-bromooctane reacted 7.6 and 4.4 times faster, respectively, than 1-chlorooctane during the alkylation; hence, C–halide bond activation is assumed to be very crucial (Scheme 8b). Considering the unlikeliness of C–H nickelation or reductive elimination as the rate influencing step,14 we believe that C(alkyl)–Cl bond activation could be a probable rate-limiting step.
The stoichiometric reaction of (thf)2NiBr2/bpy with indole 1a in the presence of LiHMDS at 60 °C resulted in the formation of 1,1′-di(pyridin-2-yl)-1H,1′H-2,2′-biindole (15%; self-coupling of 1a) (Scheme 9). We were unable to isolate the presumed intermediate (bpy)Ni(2-indolyl-2-pyridine); however, the same species was detected by MALDI-TOF analysis.16 Notably, the oxidative coupling of indole increases upon increasing the nickel loading, which led to the reduction in the yield of alkylation. This finding strongly suggests that a Ni(II)-species is unlikely the active catalyst. Considering the detection of the intermediate (bpy)Ni(2-indolyl-2-pyridine) and EPR findings, we tentatively assumed a Ni(I)-species as the active catalyst. Notably, the treatment of (thf)2NiBr2/bpy with 1-chlorooctane in the presence of LiHMDS at 60 °C did not lead to any product.
We have extended our study to the XPS analysis of the reaction to establish the oxidation state of the involved Ni-species. The Ni 2p3/2 XPS spectrum of the complex (thf)2NiBr2 displays a sharp peak centered at around 856.0 eV for the Ni(II)-species (Fig. S14(A) in the ESI†). 2p1/2 is also indexed at 873.2 eV (matching with a 17 eV separation between spin–orbit split) along with a satellite feature at 861 eV. Similarly, the Ni 2p3/2 XPS spectra of complexes (Ph3P)3NiCl and (cod)2Ni show peaks at 853.4 eV and 852.6 eV for Ni(I) and Ni(0), respectively (Fig. S13†).17 The XPS spectrum of the reaction mixture of (thf)2NiBr2, bpy and LiHMDS (10 equiv.) is much broader with a larger FWHM indicating the multiple oxidation states (Fig. 2A). We could fit two peaks in the main 2p3/2 photoelectron peak at 856.0 eV and 853.4 eV, which are assigned to (bpy)Ni(II) and a Ni(I) (approx. 37%) intermediate, respectively. This observation is consistent with the EPR finding that an odd-electron nickel species, i.e. Ni(I), is generated from the Ni(II) complex in the presence of LiHMDS. XPS analysis of the control reaction, (thf)2NiBr2 + bpy + LiHMDS + indole 1a, shows three peaks at 853.4 eV, 854.8 eV and 856.0 eV (Fig. 2B). The peaks at 853.4 eV and 856.0 eV are for Ni(I) and Ni(II), respectively. However, the peak at 854.8 eV has a slightly lower binding energy than the peaks observed for (bpy)Ni(II) or (thf)2Ni(II), and thus could be due to an electron-rich Ni(II)-species, (bpy)Ni(II)X(2-indolyl-2-pyridine).17 XPS analysis of the standard alkylation reaction, i.e. (thf)2NiBr2 + bpy + LiHMDS + 1a + 2a, also exhibited three peaks at 853.4 eV [Ni(I)], 854.8 eV [Ni(II)] and 856.0 eV [Ni(II)] (Fig. 2C). Notably, XPS analysis of the reaction without indole 1a, but in the presence of 2a [i.e. (thf)2NiBr2 + bpy + LiHMDS + 2a], showed the presence of only Ni(II) species (856.0 eV). Both the XPS and EPR findings strongly supported the involvement of a Ni(I) species that could be the probable active catalyst.
Fig. 2 X-ray photoelectron spectra: (A) (thf)NiBr2 + bpy + LiHMDS, (B) (thf)NiBr2 + bpy + LiHMDS + 1a, and (C) (thf)NiBr2 + bpy + LiHMDS + 1a + 2a (standard reaction). |
Footnote |
† Electronic supplementary information (ESI) available: Full experimental procedures and characterization data, including 1H and 13C NMR of all compounds. See DOI: 10.1039/c9sc01446b |
This journal is © The Royal Society of Chemistry 2019 |