Patricia Merdy*a,
Cyril Neytarda,
Jean-Dominique Meunierb and
Yves Lucasa
aUniversité de Toulon, Aix Marseille Univ., CNRS, IM2NP, 83041 Toulon Cedex 9, France. E-mail: merdy@univ-tln.fr
bCEREGE, CNRS, Aix-Marseille University, IRD, INRAE, 13545 Aix-en-Provence, France
First published on 21st August 2020
In order to understand Si behavior and biodisponibility in soils and plants, we evaluated the use of PDMPO (2-(4-pyridyl)-5-((4-(2-dimethylaminoethylaminocarbamoyl)methoxy)phenyl)oxazole) that was supposed to be a Si-specific fluorescence marker and to have a pH-dependent fluorescence. We studied the interactions between PDMPO and water-dissolved Si, Al and natural organic matter (humic acids, HA). Six systems with different HA, Si and Al concentrations were studied by fluorescence spectroscopy at pH 4, 7 and 9. The Al–PDMPO complex was characterized by infrared spectroscopy and the particle size distribution in solution was characterized by nano tracking analysis. We found that when usual pH buffers are not present, the PDMPO fluorescence was not pH dependent and was not Si-specific. In the PDMPO–Si–HA system, the PDMPO fluorescence signals were greatly enhanced, suggesting the formation of highly fluorescent ternary HA–PDMPO–Si groups. When Al was added to the system, the fluorescence was strongly quenched, suggesting the formation of low-fluorescence quaternary HA–PDMPO–Si–Al groups. The PDMPO fluorescence is therefore greatly sensitive to complexable metals and to natural organic matter and is therefore difficult to be applied for the quantification of Si or pH in a complex medium.
Therefore, studying the molecular interactions of dissolved or precipitated silica with biological compounds remains of great interest. In the environment, Si is abundant in the solid phase. SiO2 represents approximately 50 to 70% of the mass of the soils, in quartz mineral (SiO2) and in various forms of aluminosilicate.6 These compounds, however, are generally not very soluble and have a low bioavailability.7 In the liquid phase, dissolved Si is mainly in the form of monosilicic acid (H4SiO4), which is the dominant hydroxylated Si species in aqueous solutions between pH 2 and pH 9.8.8 When the concentration of dissolved Si in aqueous solution exceeds ≈10−3 mol L−1, polymerization of Si can occur in very varied forms depending on the species and nanoparticles particles present in solution.9 Because of their affinity with hydroxylated Si species, Al species greatly impact the outcome of precipitation.6 The relationships between dissolved Si and natural organic compounds is the subject of discussion, some studies showing the apparent absence of stable complexes in low acidic media,10 other showing the opposite in alkaline media.11 The array of possible reactions, particularly with natural organic matter, that impact Si bioavailability makes it necessary to monitor the precipitation of silicate species in natural solutions.
Among the many techniques that can be used, fluorescence is particularly advantageous if a specific Si-probe is available. It is a simple technique to implement, it is quantitative and, coupled with microscopy, it allows the visualization of the silica precipitation sites. PDMPO (2-(4-pyridyl)-5-((4(2-dimethylaminoethylaminocarbamoyl)-methoxy)phenyl)oxazole) has been widely used for this purpose.12 It was first developed to monitor the pH in live cells,13 then was found to be an excellent probe to visualize silica precipitation in cells by enhancing 7 times fluorescence when complexed on silica surface, likely through the terminal pyridine or amine groups.14
In this context, our objective was to evaluate the silicon specificity of the PDMPO in aqueous solution and its behaviour in the presence of Al and natural organic matter. We also sought to clarify the contradictions between the results obtained by 3 important studies about the fluorescence of PDMPO in aqueous media.12–14 These authors observed two main peaks, one around 450 and the other around 540 nm, whose intensity ratio changed with pH. This property would allow pH monitoring in a given media. The differences obtained between the 3 studies (Fig. 1), however, must be explained.
Fig. 1 Fluorescence emission of PDMPO in water according to Diwu et al.13 (plain lines, λex = 360 nm), Shimizu et al.14 (dashed lines, λex = 338 nm), Parambath et al.12 (dotted lines, λex = 360 nm). |
To achieve our objectives, we studied the change in the fluorescence of PDMPO at controlled pH in aqueous solutions containing amounts of Si and Al ranging from 10−7 to 10−2 mol L−1 and natural organic matter in the form of Humic Acid (HA).
Different concentrations of Na2SiO2 and Al(NO3)3 ranging from 10−1 to 10−7 μM were tested in the presence and in the absence of 120 mg L−1 humic acid (HA), in order to have 6 different systems: PDMPO, PDMPO–Si, PDMPO–Al, PDMPO–Al–Si, PDMPO–Si–HA, PMDPO–Al–Si–HA. A seventh system, Si–HA without PDMPO, was studied for comparison. All the experiments were duplicated in polypropylene bottles.
Sometimes particle precipitation was observed (Table 1), so the solutions were filtered with a 0.2 μm PES syringe filter before fluorescence analysis. Depending on its kinetics, particle precipitation may however have occurred between filtration and fluorescence analysis.
Si or Al (mol L−1) | System | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDMPO–Si | PDMPO–Al | PDMPO–Al–Si | PDMPO–Si–HA | PDMPO–Al–Si–HA | |||||||||||
pH | pH | pH | pH | pH | |||||||||||
4 | 7 | 9 | 4 | 7 | 9 | 4 | 7 | 9 | 4 | 7 | 9 | 4 | 7 | 9 | |
10−1 | X | X | X | — | — | — | — | — | — | — | — | — | — | — | — |
10−2 | X | X | X | X | X | X | X | X | X | ||||||
10−3 | X | X | X | X | X | X | X | X | |||||||
10−4 | X | X | X | X | X | ||||||||||
10−5 | X | ||||||||||||||
10−6 | — | — | — | — | — | — | |||||||||
10−7 | — | — | — | — | — | — |
For each system and at each pH we performed between 5 and 8 measurement series, each series beginning with the PDMPO only as a reference. The maximum intensity at λex = 330 nm of the 460 nm and the 510 nm peaks was normalized to the signal of the PDMPO only. We then calculated the average and the standard deviation for each condition, an example is given on Fig. 2.
Study | Optimum λex (nm) | Maximum emission peaks (nm) | pH dependence | pH control | |
---|---|---|---|---|---|
Blue | Green | ||||
This study | 330 | 455 | 510 | No | NaOH, HCl |
Diwu et al.13 | 360 | 464 | 542 | Yes | K-phosphate buffer |
Shimizu et al.14 | 338 | 450 | 534 shifting with pH | Yes | Na-phosphate buffer |
Parambath et al.12 | 360 | 454 shifting with pH | 544 shifting with pH | Yes | Citrate and phosphate buffers |
Fig. 4 Examples of 3D-fluorescence spectra obtained at different Si concentrations and pH = 4 for the PDMPO–Si system. |
Fig. 5 Fluorescence intensity at λex = 330 nm, λem = 510 nm of the PDMPO–Si system at various pH as a function of the concentration of Si in mol L−1. |
An enhancement of the fluorescence signal as Si concentration increased was observed at each of the 3 studied pH. Shimizu et al.14 observed an enhancement as well at pH ranging from 3 to 7. At pH 4, fluorescence enhancement was small, but significant at Si concentration equal or higher than 10−7 mol L−1. At pH 7 and 9, it was significant at Si concentration equal or higher than 10−4 mol L−1 or higher. At Si concentrations higher than 10−2 mol L−1, there was at pH 4 a great dispersion of the fluorescence intensities values and at pH 7 a fluorescence quenching.
Fluorescence enhancement at Si concentrations lower than 10−4 indicates the existence of a bond between the dye and dissolved silicon that modify the PDMPO vibrational state. At all the studied pH, H4SiO4 is the main dissolved silicon species, more abundant by at least two orders of magnitude compared to other possible species at pH 4 or 7 and one order of magnitude at pH 9 (Fig. 6). The difference between pH 4 and other pHs is the protonation of the pyridinium moiety. It is thus likely that, at pH 4, a proton is shared between the pyridinium moiety and an oxygen of the H4SiO4 tetrahedra.
Fig. 6 Dissolved species concentration at equilibrium and precipitation domains in aqueous solution for Si (left) and Al (right) at 25 °C. Calculation was done using the MINTEQ database values.18 Plain lines: species at equilibrium with well crystallized minerals; dashed lines: species at equilibrium with poorly crystallized or amorphous minerals. Vertical red plain lines mark the studied pHs. |
The dispersion of the fluorescence intensity values or fluorescence quenching at high Si concentration (10−1 mol L−1) was likely due to Si precipitation as amorphous silica (Table 1). According to Shimizu et al.,14 silicic acid polymerization occurred as they observed it with molybdate method, whatever the presence or absence of PDMPO. The threshold limit mentioned for Si polymerization was 2.10−3 M at pH = 6. Thermodynamic considerations (Fig. 6) confirmed that silica precipitation occurs at Si concentration equal to 10−2 mol L−1. At such concentration, however, the precipitation kinetics is likely too slow to be visually noticeable. At higher concentration, significant quantity of silica particles can adsorb PDMPO species, likely by sharing a proton from a siloxyde group.12
Results from the NTA analysis are given on Fig. 7. The PDMPO alone exhibited a peak around 47 nm that represents around 9% of the PDMPO introduced in the solution which was therefore organized in nanoparticles. In the PDMPO–Si systems, a higher and sharper peak around 45 nm corresponds to the same quantity of PDMPO but indicates another organization, therefore due to PDMPO–Si interaction.
Fig. 7 Nanoparticle size distribution in the studied systems at pH 9. The two graphs axis have the same units. |
Fig. 8 Fluorescence intensity at λex = 330 nm, λem = 510 nm of the PDMPO–Al system at various pH as a function of the concentration of Al in mol L−1. |
The fluorescence enhancement at Al concentrations lower than 10−4 at pH 4 and 7 indicates the existence of a bond between the dye and dissolved Al that modify the PDMPO vibrational state. The bond type and location on PDMPO may not be the same as for Si, due to the difference of structure of the adsorbed species (Fig. 6). At pH 4, the main dissolved Al specie is hydrated Al3+ whose first coordination shell is octahedral.19 At pH 7 and 9, it is the hydroxylated Al(OH)4− whose first coordination shell is tetrahedral.20 The particle size distribution in the PDMPO–Al system (Fig. 7) is like that of the PDMPO alone and different from that of the PDMPO–Si system, which would confirm a different bond type and location on PDMPO.
Although they were performed in a non-aqueous solvent, the results of the IR experiments gave information on the possible PDMPO–Al bond (Fig. 9). The PDMPO bands that were significatively altered when Al was added to the system relate to the ether C–O bonds and to the neighbouring amide N–H bond, which suggests that Al3+ bonds to the amide oxygen and possibly chelates the ether oxygen. Detailed studies performed on Al bonds with organic compounds with functional groups comparable to the PDMPO showed that Al binds to ketone oxygen rather than to the pyridine nitrogen.21 The new band that appeared at 1195 cm−1 can represent the offset of the C–O band which was at 1313 cm−1 in the PDMPO spectrum, this showed the existence of R–O–R′ groups.
Whatever the nature of the complex, there is a strong interaction between the Al species in solution and the PDMPO. These results showed that the PDMPO is not a Si-specific ligand. This consideration can be extrapolated to all other dissolved metal species which have a behaviour close to that of Al towards organic ligands.22 It seems indeed difficult to find a specific ligand that would exclusively binds to Si since any kind of functional group present in a molecule that would be able to bind Si would probably be even more inclined to bind other elements.
Fig. 10 Fluorescence intensities at λex = 330 nm, λem = 510 nm of the PDMPO–Al–Si system at various pH as a function of the concentration of Al and Si in mol L−1. |
The fact that the fluorescence of PDMPO was neither enhanced nor quenched indicates that neither Si nor Al interacted with it, therefore that they interacted with each other, or that they both interacted with PDMPO in a way that neutralized their respective effects. Although precipitation has not been visually observed at Al and Si concentrations lower than 10−3 and 10−4 mol L−1 for pH 7 and 9, respectively, thermodynamic data showed that solutions were oversaturated with regard to kaolinite over 10−7 mol L−1 at pH 7 and 9 and over 3 10−5 mol L−1 at pH 4. Aluminosilicate species and oligomers can form before suspended particles are visible in the solution.20 The observed dispersion of the fluorescence intensity measurements can be related to uncontrolled kinetics of mineral particles precipitation. The particle size distribution (Fig. 8) showed a peak like that of the PDMPO–Si system, but centered on smaller particles, around 32 nm, when the peak of the PDMPO alone system disappeared. This result shows a probable interaction between PDMPO and both Al and Si.
Fig. 11 Examples of 3D-fluorescence spectra obtained at pH = 9 and for different Si concentrations for the PDMPO–Si–HA system. A and C, see text. |
Fig. 12 show the effects of adding Si on the fluorescence signal at the same emission/excitation wavelengths as before. The fluorescence intensities of the Si–HA system without PDMPO are also given for comparison. In both systems, results were similar for the A and C peaks of HA. At pH 4, there were no significant variations of fluorescence intensities in the PDMPO–Si–HA system, when it was observed a significant quenching of the HA fluorescence in the Si–HA system and, as seen in Fig. 6, a significant enhancement in the PDMPO–Si system. The sum of the intensities may therefore have neutralized variations in the opposite direction, but other processes may be at work. At pH 7 and 9, there was a significant enhancement in all systems, much stronger in the presence of both Si and PDMPO. This enhancement occurred without significant change of the peaks energy and was thus related to an increase in quantum yields. The strong fluorescence enhancement in the PDMPO–Si–HA system is therefore likely due to HA-PDMPO-Si groups more rigid than Si–PDMPO or Si–HA groups. The particle size distribution confirmed this hypothesis, with a single sharp peak centered around 40 nm. These data demonstrate that the Si–PDMPO fluorescence is dependent on the type of organic compounds present in the medium.
Fig. 13 Examples of 3D-fluorescence spectra obtained at pH 4 and different Si and Al concentrations for the PDMPO–Al–Si–HA system. |
Fig. 14 Fluorescence intensities at λex = 330 nm, λem = 510 nm of the PDMPO–Al–Si–HA system at various pH as a function of the concentration of Al and Si in mol L−1. |
Among the processes that can explain variations in fluorescence intensity in the system, we can consider the formation of aluminosilicate nanoparticles,24 removing Si from the Si–PDMPO–HA interactions that have been shown to exhaust the signal, or the complexation of Al with HA sites, hindering the formation of fluorescent HA–PDMPO–Si fluorescent groups. These two processes, however, would not result in a signal quenching. The formation of low fluorescent HA–PDMPO–Al–Si quaternary complexes is therefore the most likely hypothesis. Other types of investigations such as NMR would be necessary to differentiate between possible mechanisms. The size particle distribution was different from other systems, with a main peak centred around 200 nm and a total mass of suspended particles four orders of magnitude higher. The presence of both Al and Si induced particle precipitation. The presence of species likely to complex on the sites of PDMPO or of natural organic matter can greatly modify the fluorescence of PDMPO in complex medium.
Dissolved Si as well as dissolved Al caused a quite similar enhancement of PDMPO fluorescence. The PDMPO is therefore not a Si-specific ligand.
Regarding complex systems, strong fluorescence enhancements in the PDMPO–Si–HA system suggests the formation of highly fluorescent HA–PDMPO–Si groups and demonstrates that the Si–PDMPO fluorescence depends on the type of organic compounds present in the medium. The strong fluorescence quenching in the PDMPO–Si–Al system suggests the formation of low fluorescent HA–PDMPO–Al–Si quaternary complexes and demonstrates that the presence of species other than Si capable of complexing on PDMPO can greatly modify the PDMPO fluorescence in a complex medium.
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