Dan Yua,
Di Wua,
Jing-Yao Liua,
Si-Yi Lib and
Ying Li*a
aInstitute of Theoretical Chemistry, Laboratory of Theoretical and Computational Chemistry, College of Chemistry, Jilin University, Changchun 130023, P. R. China. E-mail: liyingedu@jlu.edu.cn
bDepartment of Transdisciplinary Science and Engineering, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro, Tokyo 152-8551, Japan
First published on 16th September 2020
The complexes formed between MgX2 (X = F, H) molecules and alkyl radicals Y [Y = CH3, CH2CH3, CH(CH3)2, and C(CH3)3] have been characterized by using quantum chemical methods. The binding distance in all cases is less than the sum of vdW radii of Mg and C, indicating the formation of a non-covalent interaction, namely single-electron magnesium bond. Energy decomposition analysis reveals that electrostatic and polarization contributions are the major components responsible for the stability of the studied complexes. According to interaction energy, atoms in molecules, and independent gradient model analyses, methyl substitution on electron donor Y imposes a positive effect on its complexation with MgX2. When compared with other nonbonded interactions, the single-electron magnesium bond is found to have strength comparable to those of the single-electron beryllium bond and π-magnesium bond.
Hydrogen bonding is one of the most common weak interactions and was first proposed in early 20th century, and is still an active topic of scientific research due to its importance in many chemical and biological processes.21,22 In general, a hydrogen bond has the form of X–H⋯Y, where the Y moiety interacts with the proton donor through its lone pair(s). Hydrogen bond interaction has an intrinsic directionality, and is characterized by saturability. In recent years, many different types of untraditional hydrogen bonds have been developed by involving diverse electron donors including conjugated molecules, radicals, metal hydrides, and even a localized electron. Correspondingly, the concepts of π-hydrogen bond,23,24 single-electron hydrogen bond,25 dihydrogen bond,26 and electron hydrogen bond27,28 have been raised successively.
Owing to the electronic similarity among lithium, sodium, and hydrogen elements, efforts have also been devoted to exploring the possibility that lithium or sodium salt molecules serve as Lewis acids to interact with electron donors. Consequently, the existence of lithium bonding29–31 and sodium bonding32,33 interactions has been put forward. In 2009, Yáñez and co-workers further enriched the study of non-covalent interactions with a series of beryllium bonding systems in which the BeX2 (X = H, F, Cl, OH) molecules take the role of electron acceptor.34 As an analog of beryllium bonds, magnesium bond was theoretically predicted shortly afterwards.35,36 Different from beryllium and its compounds, the magnesium-containing complexes are non-toxic, which renders their experimental identification much more practicable. Besides, magnesium is an indispensable element in all the organisms and takes part in many important biochemical processes.37,38 Thus, the in-depth study of all sorts of magnesium bonding systems may provide meaningful references for biological and environmental chemistry studies.
In the present work, we aim to gain a fundamental understanding of the interaction between magnesium salt molecules and free radicals since the latter are known to play a crucial role in chemistry, especially organic chemistry,39,40 atmospheric chemistry41,42 and biochemistry.43,44 By using quantum chemical calculations, the formation of single-electron magnesium bond between MgX2 (X = F, H) and a series of alkyl radicals (methyl, ethyl, isopropyl, and tertiary butyl) was characterized in detail and compared with other noncovalent interactions. Besides, methyl substitution effect on structure and bonding of the resulting complexes was analyzed as well.
The Bader's quantum theory of atoms-in-molecules (QTAIM)48,49 was carried out to characterize the chemical bonding of the studied complexes. By the aid of Multiwfn program,50 the bond critical points (BCPs) were found through the analysis of wave function.51 Meanwhile, the electron density ρ(r) and its corresponding Laplacian (∇2ρ) at the BCPs were obtained. To intuitively show the studied single-electron magnesium bond in real space, we applied the independent gradient model (IGM) method52 (embedded in the Multiwfn program) in combination with the visual molecular dynamics (VMD) program.53 With basis set superposition error (BSSE)54 correction, intermolecular interaction energies of the X2Mg⋯Y complexes were obtained at the CCSD(T)//MP2/aug-cc-pVTZ level. To provide more insight into on the nature of interaction between MgX2 and radical molecules, the localized molecular orbital energy decomposition analysis (LMOEDA)55 were performed by using the GAMESS program package.56 According to LMOEDA, the total interaction energy of a complex is composed of electrostatic (ΔEelstat), exchange-repulsion (ΔEex+rep), polarization (ΔEpol), and correlation (ΔEdisp) contributions, as shown in eqn (1)
ΔEint = ΔEelstat + ΔEex+rep + ΔEpol + ΔEdisp | (1) |
In this work, the first three components were computed at the SCF level while the ΔEdisp term was obtained at the MP2 level.
Fig. 1 Optimized structures of the (a) F2Mg⋯Y and (b) H2Mg⋯Y [Y = CH3, CH2CH3, CH(CH3)2, C(CH3)3] complexes and the relative energies of isomers (Erel, in kcal mol−1) at the MP2/aug-cc-pVTZ level. |
Complex | Symmetry | L | α | RMg–X1 | RMg–X2 | DX1–Mg–C1–H1 |
---|---|---|---|---|---|---|
I | Cs | 2.573 | 163.0 | 1.778 | 1.779 | 0.0 |
II-1 | Cs | 2.509 | 160.1 | 1.781 | 1.781 | 32.2 |
II-2 | C1 | 2.521 | 160.1 | 1.780 | 1.783 | 12.3 |
III-1 | C1 | 2.485 | 158.3 | 1.782 | 1.785 | 28.0 |
III-2 | Cs | 2.498 | 157.8 | 1.783 | 1.783 | 89.1 |
IV | Cs | 2.478 | 156.7 | 1.785 | 1.785 | |
I′ | Cs | 2.707 | 166.6 | 1.717 | 1.717 | 89.9 |
II′ | Cs | 2.644 | 164.3 | 1.719 | 1.719 | 31.8 |
III′ | C1 | 2.615 | 163.0 | 1.720 | 1.722 | 24.9 |
IV′ | C1 | 2.623 | 161.5 | 1.722 | 1.722 |
Complex | C1 | Radical in complex | Mg | X1/X2 in complex | ||
---|---|---|---|---|---|---|
In monomer | In complex | In complex | Δq | |||
I | −0.467 | −0.527 | 0.019 | 1.842 | −0.021 | −0.931 |
II-1 | −0.260 | −0.344 | 0.019 | 1.832 | −0.031 | −0.926 |
II-2 | −0.347 | 0.018 | 1.841 | −0.022 | −0.931/−0.930 | |
III-1 | −0.072 | −0.165 | 0.015 | 1.835 | −0.028 | −0.926/−0.925 |
III-2 | −0.166 | 0.018 | 1.833 | −0.030 | −0.925 | |
IV | 0.102 | 0.011 | 0.004 | 1.844 | −0.019 | −0.924 |
I′ | −0.467 | −0.510 | 0.011 | 1.425 | −0.003 | −0.717 |
II′ | −0.260 | −0.323 | 0.011 | 1.429 | 0.001 | −0.720 |
III′ | −0.072 | −0.140 | 0.012 | 1.433 | 0.005 | −0.720/−0.723 |
IV′ | 0.102 | 0.046 | 0.003 | 1.439 | 0.011 | −0.721 |
From Fig. 1 and Table 1, both F2Mg⋯CH3 (I) and H2Mg⋯CH3 (I′) complexes possess Cs symmetry. Their structural difference mainly comes from different interaction orientation between X2Mg molecule and methyl, which is reflected in the ∠X1MgC1H1 dihedral angle (0° for I and 89.9° for I′). The binding distances (L), defined as the distance between Mg and C1 atoms, are 2.573 and 2.707 Å for I and I′, respectively. The interaction between F2Mg and ethyl, isopropyl, and tertiary butyl results in five complexes. The II-1 and II-2 complexes can be regarded as being obtained when the H2 and H3 atoms of F2Mg⋯CH3 are replaced by methyl, respectively. The energy difference between them is only 0.02 kcal mol−1. Similarly, the III-1 and III-2 isomers can be obtained when two of the methyl hydrogen atoms in F2Mg⋯CH3 are substituted. III-2 is 0.21 kcal mol−1 higher in total energy relative to III-1. The situation is somewhat different for the BeH2-based system. From Fig. 1, MgH2 binding with ethyl (or isopropyl) leads to only one structure. It can be seen that isomer II′ resembles II-1 in geometry, while the structure of III′ parallels that of III-1. The F2Mg⋯C(CH3)3 (IV) and H2Mg⋯C(CH3)3 (IV′) complexes share a similar geometry, and the ∠F1MgC1C2 dihedral angle of 88.5° is close to the ∠H1MgC1C2 dihedral angle of 88.9°.
Besides, to evaluate the performance of modern DFT functionals for characterizing such magnesium-bonding system, structure optimizations of the X2Mg⋯CH3 and X2Mg⋯CH2CH3 complexes were also performed by using the wB97XD, M06-2X, B3LYP-D3(BJ), and B2LYPD3 methods with the aug-cc-pVTZ basis set. The results are compared with those of the MP2 method in Table S1 in ESI.† It can be found that all these DFT functionals tend to underestimate the Mg⋯C binding distance (by 0.034–0.156 Å). For the MgF2-based system, the wB97XD and M06-2X functionals overestimate the F–Mg–C angle while the other two underestimate it. For the MgH2-based system, the H–Mg–C angle is always underestimated by these functionals. It is worth noting that the wB97XD and M06-2X functionals can only yield the II-1 isomer, but fail to predict the II-2 isomer. In contrast, the B3LYP-D3(BJ) and B2LYPD3 functionals are able to predict both structures. Hence, it can be concluded that the B3LYP-D3(BJ) and B2LYPD3 methods can be used to describe the structures of the studied species and yield basically consistent results with those obtained at the MP2 level.
From Table 1, the binding distances of the studied X2Mg⋯Y species vary in the range of 2.478–2.707 Å, which are far shorter than 3.9 Å, namely the sum of van der Waals radii of Mg and C atoms.57 This fact indicates a certain interaction between MgF2/MgH2 and the radicals. To illustrate this, the potential energy surfaces of the F2Mg⋯CH3 and H2Mg⋯CH3 complexes have been roughly obtained by scanning the Mg⋯C distance and the X–Mg–C (X = F, H) angle at the MP2/aug-cc-pVTZ level (see Fig. S2†). Herein, the Mg⋯C distance varies from 5.0 Å to 2.0 Å in steps of −0.3 Å, and the X–Mg–C angle increases from 90° to 102° with increments of 1.2°. As can be seen from the PES plot, the total energies of both dimers decrease as the MgX2 molecule approaches the methyl radical, showing an attraction interaction between two species. Ultimately, minimum potential energy structures have been reached, which are basically consistent with the optimized structures of complexes I and I′. The singly occupied molecular orbitals (SOMOs) of the complexes and their corresponding free radicals are shown in Fig. 2, where the orbital energies are also included. It can be seen that the SOMOs of complexes are mainly contributed from those of radicals, and the MgX2 molecule acts as the single electron acceptor. Thereby the interaction between the two monomers of the X2Mg⋯Y complexes can be defined as a single-electron magnesium bond. Furthermore, the SOMO orbital energies of complexes are lower by 0.019–0.038 eV compared with corresponding free radicals, revealing that the formation of single-electron Mg bond enhances the stability of the radicals.
Fig. 2 The singly occupied molecular orbitals and corresponding orbital energies (in eV) of the single-electron magnesium bonding complexes and corresponding monomers at the MP2/aug-cc-pVTZ level. |
To intuitively show the bonding between MgX2 molecule and Y radicals, the independent gradient model (IGM) analysis of the X2Mg⋯Y complexes was performed. A descriptor (δginter) is then derived that uniquely defines intermolecular interaction regions. The resulting δginter isosurfaces are presented in Fig. 3. It is known that the blue and green colors on the isosurfaces stand for strong intermolecular attractive interaction and weak van der Waals interaction, respectively. As shown in Fig. 3, the single-electron Mg bond, which mainly lies between Mg and C1 atoms, is represented by blue-green isosurfaces. Note that there are also small green regions between F of MgF2 and methyl H atom of the radicals in the II-2, III-1, III-2 and IV complexes, reflecting a weak intermolecular attraction. This can be understood given the relatively shorter F⋯H2 distances (2.706–2.762 Å) in these four dimers and the negative charge of the F atom (0.924–0.931|e|). The overall size of the isosurface increases as the number of methyl substituents increases, implying an increasing bonding strength. Note that the isosurfaces have more blue component for the F2Mg⋯Y complexes compared with the H2Mg-based series, indicating that the bonding strength of the former is stronger than that of the latter. This is consistent with the shorter L values of the former (2.478–2.573 Å) than those of the latter (2.623–2.707 Å).
Fig. 3 The isosurfaces of δginter (isovalue = 0.01) for the X2Mg⋯Y [X = F, H; Y = CH3, CH2CH3, CH(CH3)2, C(CH3)3] complexes. |
From Table 1, the binding distance decreases in the sequence F2Mg⋯CH3 (2.573 Å) > F2Mg⋯CH2CH3 (2.509 and 2.521 Å for II-1 and II-2, respectively) > F2Mg⋯CH(CH3)2 (2.485 and 2.498 Å for III-1 and III-2, respectively) > F2Mg⋯C(CH3)3 (2.478 Å). Hence, the methyl substitution effect on the formation of single-electron Mg bond is positive. Similarly, the Mg⋯C1 distance of the H2Mg-based series varies in the order H2Mg⋯CH3 (2.707 Å) > H2Mg⋯CH2CH3 (2.644 Å) > H2Mg⋯CH(CH3)2 (2.615 Å). Compared with H2Mg⋯CH(CH3)2, the H2Mg⋯C(CH3)3 complex has a slightly longer binding distance of 2.623 Å, which can be attributed to steric-hindrance effect. The case is similar to previously reported results of single-electron Be bonding systems.58 Note that the Mg–X bond of MgX2 is elongated by 0.010–0.017 Å upon the interaction with the Y radicals. Hence, the formation of single-electron Mg bond renders the Mg–X bonds weakened. In addition, the MgX2 subunit bends from the linear geometry, and the bending angles (α) are 156.7–166.6° (see Fig. 1 and Table 1). From Table 1, the more methyl groups the Y radical contains, the more the MgX2 molecule is bent.
From natural population analysis (NPA), the Y moieties carry 0.003–0.019|e| positive charges in the complexes (see Table 2), confirming that the radical plays the role of electron donor and MgX2 serves as electron acceptor during the formation of single-electron Mg bond. To shed more light on the charge transfer interaction between MgF2/MgH2 and Y radicals, the related orbitals and corresponding second-order stabilization energies are listed in Table 3. For the F2Mg-based series, the main charge transfer arises from the unpaired electron of C1 atom (LP(C)) to the empty 3s orbital (s*(Mg)) of Mg. For the F2Mg⋯C(CH3)3 complex, there is an additional electron donation from LP(C) to the empty 3p orbital of Mg. As for the H2Mg-based complexes, the LP(C) → p*(Mg) orbital interaction is dominant in intermolecular charge transfer. Besides, there are some minor charge transfer contributions, for example, from LP(C) to antibonding orbital, from σCH bonding orbital to the empty 3s and 3p orbitals of Mg, and from the σCC bonding orbital to p*(Mg) orbital (only for the IV′ complex).
SCF | MP2 | CCSD(T) | BSSE | EC | ρ(r) | ∇2ρ(r) | |
---|---|---|---|---|---|---|---|
I | −7.34 | −8.18 | −8.61 | 0.54 | 14.8% | 0.014 | 0.060 |
II-1 | −9.21 | −11.05 | −11.52 | 0.89 | 20.1% | 0.017 | 0.073 |
II-2 | −9.48 | −11.18 | −11.70 | 0.81 | 19.0% | 0.016 | 0.071 |
III-1 | −10.53 | −13.33 | −13.81 | 1.21 | 23.8% | 0.018 | 0.080 |
III-2 | −10.90 | −13.52 | −14.06 | 1.09 | 22.5% | 0.018 | 0.078 |
IV | −11.36 | −15.12 | −15.56 | 1.51 | 27.0% | 0.019 | 0.084 |
I′ | −2.71 | −4.93 | −5.25 | 0.19 | 48.4% | 0.012 | 0.039 |
II′ | −3.62 | −6.94 | −7.13 | 0.30 | 49.2% | 0.013 | 0.048 |
III′ | −4.12 | −8.53 | −8.60 | 0.41 | 52.1% | 0.015 | 0.054 |
IV′ | −4.05 | −9.23 | −9.55 | 0.52 | 57.6% | 0.015 | 0.054 |
With a lower-lying LUMO orbital, MgF2 presents a higher acidity than MgH2 molecule. Thus, a stronger interaction can be expected when the former serves as electron acceptor instead of the latter. From Table 4 and Fig. S3a,† the interaction energy of a F2Mg⋯Y complex is 3.36–6.01 kcal mol−1 larger than that of corresponding H2Mg⋯Y complex. In addition, the absolute interaction energies of the MgF2-containing complexes follow the order F2Mg⋯CH3 (8.61 kcal mol−1) < F2Mg⋯CH2CH3 (11.52 and 11.70 kcal mol−1 for II-1 and II-2, respectively) < F2Mg⋯CH(CH3)2 (13.81 and 14.06 kcal mol−1 for III-1 and III-2, respectively) < F2Mg⋯C(CH3)3 (15.56 kcal mol−1). This trend also applies to the MgH2-based series. Obviously, the interaction energy of an X2Mg⋯alkyl complex becomes larger as more methyl substituents are involved in the alkyl radical. Note that the interaction energy of isomer II-2 is 0.18 kcal mol−1 larger than that of II-1, which might be attributed to the additional F2δ−⋯H2δ+ interaction in II-2. Similarly, isomer III-2 contains one more Fδ−⋯Hδ+ secondary interaction compared with III-1, justifying its slightly larger interaction energy.
From Table 4, the interaction energies vary from −8.61 to −15.56 kcal mol−1 for the F2Mg⋯Y complexes, and from −5.25 to −9.55 kcal mol−1 for the H2Mg⋯Y series. Note that these values are comparable to those (−6.13 to −14.92 kcal mol−1)58 of the X2Be⋯Y [X = F, H; Y = CH3, CH2CH3, CH(CH3)2, and C(CH3)3] complexes. Meanwhile, the interaction energies are −13.47 ∼ −15.80 kcal mol−1 for F2Mg⋯π and −7.22 ∼ −8.91 kcal mol−1 for H2Mg⋯π interactions where the π electron donors are acetylene, ethylene and benzene molecules.36 Hence, it can be concluded that single-electron magnesium bond, single-electron beryllium bond, and π-magnesium bond are comparable in strength.
To deepen the understanding of the nature of single-electron Mg bond, the interaction energies of the X2Mg⋯Y complexes have been further analyzed by using the LMOEDA method. The energy decomposition results present considerable electrostatic and polarization interactions in the complexation between MgX2 and radical molecules. The former accounts for approximately half of the total attractive interaction energy, and the latter makes up 27.6–38.1% (see Table 5). Besides, the dispersion energy contributes 5.7–21.6% to the stabilization of the studied complexes, especially for the MgH2-based series. From the table, all the terms, namely the electrostatic, polarization, exchange-repulsion and dispersion energies, increase with the growth of number of methyl groups in the system except that III-2 has a slightly higher electrostatic energy than IV. The LMOEDA analysis also reveals that a F2Mg⋯Y complex possesses larger attractive interaction energy and smaller exchange-repulsion energy than corresponding H2Mg⋯Y complex, giving rise to the larger Eint value of the former.
Eelst | Eex+rep | Epol | Edisp | |
---|---|---|---|---|
I | −8.73 (57.8%) | 6.95 | −5.51 (36.5%) | −0.86 (5.7%) |
II-1 | −11.52 (54.2%) | 10.17 | −7.86 (37.0%) | −1.86 (8.8%) |
II-2 | −12.26 (56.6%) | 10.73 | −7.66 (35.4%) | −1.73 (8.0%) |
III-1 | −12.98 (51.3%) | 11.94 | −9.48 (37.5%) | −2.82 (11.2%) |
III-2 | −14.02 (54.5%) | 12.20 | −9.07 (35.3%) | −2.63 (10.2%) |
IV | −13.92 (48.7%) | 13.48 | −10.90 (38.1%) | −3.78 (13.2%) |
I′ | −8.32 (55.8%) | 9.95 | −4.36 (29.3%) | −2.22 (14.9%) |
II′ | −10.50 (54.3%) | 12.37 | −5.50 (28.5%) | −3.33 (17.2%) |
III′ | −12.23 (53.0%) | 14.51 | −6.42 (27.8%) | −4.42 (19.2%) |
IV′ | −13.10 (50.8%) | 16.14 | −7.11 (27.6%) | −5.58 (21.6%) |
X–Mg–X sym. stretch | X–Mg–X antisym. stretch | Mg⋯C stretch v | |||||
---|---|---|---|---|---|---|---|
v in complex | Δv | IR intensity | v in complex | Δv | IR intensity | ||
I | 544.7 | −6.8 | 17.4 | 830.6 | −30.7 | 152.5 | 209.5 |
II-1 | 544.1 | −7.4 | 24.5 | 825.0 | −36.3 | 96.0 | 229.2 |
II-2 | 543.6 | −7.9 | 25.0 | 822.4 | −38.9 | 146.5 | 224.5 |
III-1 | 542.5 | −9.0 | 31.5 | 815.7 | −45.6 | 140.3 | 258.5 |
III-2 | 543.2 | −8.3 | 32.1 | 815.5 | −45.8 | 142.5 | 249.7 |
IV | 541.7 | −9.8 | 34.2 | 809.9 | −51.4 | 134.4 | 200.8 |
I′ | 1601.9 | −34.3 | 13.4 | 1621.0 | −38.0 | 484.3 | 150.4 |
II′ | 1594.7 | −41.5 | 21.7 | 1612.5 | −46.5 | 485.3 | 175.3 |
III′ | 1588.7 | −47.5 | 33.6 | 1606.5 | −52.5 | 473.0 | 231.9 |
IV′ | 1586.1 | −50.1 | 38.1 | 1602.7 | −56.3 | 465.6 | 352.8 |
From Table 6, both X–Mg–X symmetric and antisymmetric stretching vibrational frequencies decrease as a result of the complexation between MgX2 and radical molecules, which accords well with the lengthening of the Mg–X bonds. The antisymmetric X–Mg–X and symmetric H–Mg–H stretching vibration frequencies are red-shifted by 30.7 to 56.3 cm−1 in the complexes. In contrast, the F–Mg–F symmetric stretching frequency has a minor redshift of less than 10 cm−1. This may be attributed to the stronger intermolecular interaction of the F2Mg⋯Y complexes and the bent structure of the MgF2 subunit, which bring about coupling of the symmetric stretch of the F–Mg–F bond with the stretching Mg⋯C1 bond. Note that the similar vibrational-mode coupling even results in abnormal blue-shifted F–Be–F symmetric stretch in the studies of beryllium bonding systems.34,58 In addition, it has been found that the antisymmetric stretching vibration of the MgX2 subunit has larger IR intensity than symmetric stretching vibration, especially in the MgH2-based complexes.
Fig. 4 Molecular graphs of the (a) F2Mg⋯Y and (b) H2Mg⋯Y [Y = CH3, CH2CH3, CH(CH3)2, C(CH3)3] complexes. |
From Fig. 4, there are bond critical points between MgX2 and radicals in all the cases, indicating the formation of single-electron magnesium bond therein. It is worth mentioning that there are also interaction paths between F of MgF2 and H of the C(CH3)3 radical in complex IV, only their corresponding electron density (ρ = 0.006 au.) is quite small. As shown in Table 4, the values of electron density and Laplacians at the Mg⋯C1 BCPs are in the range of 0.012–0.019 and 0.039–0.084 au, respectively. Besides, both ρ and ∇2ρ values increase gradually with the increasing number of methyl groups involved in the X2Mg⋯Y complexes. From Fig. S3b,† the evolution of electron density at the Mg⋯C1 BCP shows a similar trend to that of interaction energy. This again reflects the positive role of the methyl substituent in the single-electron magnesium bond formation. According to a previous study of π-magnesium bond, the values of electron density at the π⋯Mg BCPs also range from 0.012 to 0.019 au.,36 also reflecting that π-magnesium bond and single-electron magnesium bond are close to each other in strength.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/d0ra06591a |
This journal is © The Royal Society of Chemistry 2020 |