Soumitra
Das
*,
Sandeep
Nigam
,
Pramod
Sharma
and
Chiranjib
Majumder
*
Chemistry Division, Bhabha Atomic Research Centre, Mumbai Homi Bhabha National Institute (HBNI), Mumbai, India. E-mail: soumitra@barc.gov.in; chimaju@barc.gov.in
First published on 18th March 2024
One of the most fundamental aspects of cluster science is to understand the structural evolution at the atomic scale. In this connection, here we report a comprehensive study of the atomic and electronic structures of (CuO)n clusters for n = 1 to 12 using DFT-based formalisms. Both the plane wave-based pseudo-potential approach and LCAO-MO-based method have been employed to obtain the ground state geometries of neutral, cation and anion copper oxide clusters. The results reveal that neutral copper oxide clusters favor a planar ring structure up to heptamer and from octamer onwards they adopt a three-dimensional motif with (CuO)9 and (CuO)12 forming a barrel-shaped layered structure. Detailed electronic structure analysis reveals that the transition of the atomic structure from 2D to 3D is guided by the energy balance of the Cu–O (d–p) and Cu–Cu (d–d) bonds. The removal of one electron from the cluster (cation) results in slightly stretched bonds while the addition of one electron (anion) showed compression in the overall geometries. The thermodynamic and electronic stability of these clusters has been analyzed by estimating their binding energy, ionization energy and electron affinity as a function of size. Remarkably, among these clusters, the octamer (CuO)8 and dodecamer (CuO)12 show higher binding energy and electron affinity (∼6.5 eV) with lower ionization energy (5.5–6.0 eV). This unique feature of the octamer and dodecamer indicates that they are very promising candidates for both oxidizing and reducing agents in different important chemical reactions.
Experimentally, copper oxide clusters are prepared by laser ablation/sputtering of metallic copper or CuO powder in the gas phase and characterization of the structure, composition and stability is carried out by mass spectrometry.19–23 On the basis of the reports available, it is seen that generally these clusters are produced with non-stoichiometric compositions i.e., either in oxygen deficient form (CunOm: n > m) or in oxygen rich conditions (CunOm: n < m).19,20 Mafune and co-workers studied the thermal and chemical stability of copper oxide clusters at elevated temperature where oxygen deficient clusters (n:m = 3:2) are found to be more stable due to the release of oxygen.21 Also, reactions of different molecules such as CO and NO with oxygen deficient clusters were studied, which leads to the formation of O2 and NO2, respectively.22,23 Studies were extended to oxygen rich clusters (CuOm: m ≤ 6) where photoelectron spectroscopy of the neutral and anion clusters was explored.24–27 Theoretical studies compliment these studies by predicting the structural motifs of the oxygen rich clusters.28–32 Thus, oxygen rich and oxygen deficient clusters are reasonably well investigated; however, there are fewer reports on stoichiometric clusters. Matsuda et al. observed stoichiometric clusters under single photon ionization conditions (118 nm) where the clusters undergo the least fragmentation in the laser ionization process.33 Bae and co-workers studied the structure and electronic property of stoichiometric clusters (CuO)n using density functional theory, where non-planar structures are found to be the most stable isomer for n > 4.34,35 Though there are few experimental and theoretical works on stoichiometric copper oxide clusters, a systematic study on the evolution of atomic and electronic structure is still missing. Understanding the stoichiometric clusters is even more requisite as the bulk CuO is stoichiometric in nature.
In the present work, a systematic study of the structure and electronic property of copper oxide clusters (CuO)n (n = 1–12) has been carried out using density functional theory. Neutral clusters are optimized using the plane wave-based method, where two exchange correlation functionals, namely Perdew–Burke–Ernzerhof (PBE) and hybrid functional (HSE06), have been employed to understand the influence of bonding and correlation between electronic structure and atomic structure. Several new isomers have been established for copper oxide clusters (CuO)n, which have not been reported earlier.34 Based on the most stable isomers, structural transition from two dimensional (2D) to three dimensional (3D) has been observed in copper oxide clusters. Moreover, a few ground state structures of the clusters assume a nano-barrel structure. Previously, a nano-barrel structure has been reported for copper oxide where the nano-sheet is folded to form a barrel-like structure for very large clusters (top-down approach).36 In the present work, we have established the structural transformation from a nano-ring to nano-barrel structure in copper oxide clusters in the small size regime (bottom-up approach). A detailed study of the projected density of states (PDOS) explains how the p-orbitals of oxygen and d-orbitals of the Cu atom influence the structural transformation of the (CuO)n cluster from 2D to 3D. The structures of the cations and anions were also optimized using the linear combination of atomic orbitals approach and they were compared with the neutral counterpart. Based on the energetics of the neutral, cation and anion clusters, the binding energy, ionization energy and electron affinity of the copper oxide clusters have been calculated as a function of size. Using these values, the thermodynamic stability and reactivity of these clusters in chemical reactions has been explored.
The stability or binding energy of each cluster is calculated with respect to the CuO monomer as a unit following equation (i). In addition, we have also calculated the relative stability (equation ii) of each cluster with respect to its nearest neighbor. The binding energy (BE) of the copper oxide monomer has been calculated by using the energy of the CuO monomer Cu and O.
BE(CuO)n = [n·E(CuO) − E(CuO)n]/n | (i) |
Δ2E = 2E(CuO)n − E(CuO)n−1 − E(CuO)n+1 | (ii) |
In order to underscore the accuracy of the pseudopotentials of the Cu and O atoms, first we have optimized the CuO bulk (monoclinic) using both PBE and the hybrid exchange correlation functional (HSE06) where the Brillouin zone (BZ) is sampled with a 5 × 5 × 5 k-point grid. Both functionals show similar Cu–O bond length and Cu–O–Cu bond angle. The bulk CuO with a monoclinic unit cell has a square planar CuO4 unit arranged in an eclipsed fashion. In the axial/perpendicular directions of the CuO4 square planar, the Cu-atoms are connected to each other via Cu–Cu bonds. Using both PBE and the hybrid functional (HSE06), the lattice parameters (a = 4.52, b = 3.57, c = 5.11 and α = 90°, β = 97°, γ = 90°) are found to be in good agreement with the literature value.45
For calculations of the cation and anion of the most stable isomer of the copper oxide clusters, the linear combination of atomic orbitals-molecular orbitals (LCAO-MO) approach is used as implemented in GAMESS.46 Here, the LCAO-MO approach is used over the plane wave-based approach as it provides better accuracy for charged species. First, we have evaluated several basis sets (i.e., 6-31, 6-31 (d, p), 6-311, 6-311(d, p), LANL2DZ) and methods (i.e., B3LYP, B3PW91) for the calculation of cations and anions. Out of these, the LANL2DZ basis set in the B3LYP method is found to produce results with reasonable accuracy. In addition, it is worth mentioning that as the calculations of neutral clusters were performed using the pseudopotential approach in VASP, we felt that using the LANL2DZ basis set, based on frozen core approximation, is appropriate for comparing the results of neutral, cation and anion clusters.
Cluster size (n) | Hybrid functional (HSE06) | ||||
---|---|---|---|---|---|
Cu–O | Cu–Cu | Average Cu–O–Cu bond angle (degree) | |||
Avg. interatomic distance (Å) | No of bonds | Avg. interatomic distance (Å) | No of bonds | ||
a Cu–Cu interatomic distance up to 3 Å is considered as a bond. | |||||
1 | 1.73 | 1 | — | — | — |
2 | 1.83 | 4 | 2.30 | 1 | 78.0 |
3 | 1.78 | 6 | 2.45 | 3 | 86.9 |
4 | 1.75 | 8 | 2.88 | 4 | 111.3 |
4-3D | 1.96 | 12 | 2.55 | 6 | 79.6 |
5 | 1.75 | 10 | 3.00 | 5 | 121.5 |
6 | 1.72 | 12 | 3.15 | 132.2 | |
7 | 1.72 | 14 | 3.21 | 138.0 | |
8 | 1.95 | 24 | 2.55, 3.00 | 16 | 84.0, 110.0 |
8-Planar | 1.72 | 16 | 3.35 | 132.0 | |
9 | 1.90 | 27 | 2.65, 4.00 | 18 | 90.0, 126.0 |
10 | 1.84 | 30 | 2.55 | 10 | 83.2, 120.4 |
11 | 1.91 | 33 | 2.60 | 13 | 84.3, 103.0, 112.0, 136.9, 146.6 |
12 | 1.84, 1.96, 2.06 | 40 | 2.65, 2.90 | 24 | 103.4, 138.8 |
Bulk | 1.94 | 4 | 2.88 | 4 | 102.7, 119.0 |
Fig. 1 The lowest energy isomers of copper oxide clusters (n = 1–12) using the hybrid functional (HSE06). |
The lowest energy isomers of CuO clusters show a three-dimensional motif from octamer onwards. For (CuO)8, a bilayer structure consisting of two tetramer units of (CuO)4 arranged in a staggered fashion is found to be the most stable isomer. In comparison to a planar ring isomer of (CuO)8, the 3D layered isomer is ∼0.75 eV more stable (Table S1, ESI†). Thus, a significant structural transition from a planar ring to a three dimensional (3D) stacked layer structure is observed from n = 7 to n = 8. This result is different from previous literature where the transition of the planar structure to a non-planar structure is reported from trimer to tetramer.34 In line with the structural transition, we also find a significant change in the trend of Cu–O and Cu–Cu bond length. The Cu–O bond length is longer (1.95 Å) in the 3D layered structure than the 2D planar structure (1.72 Å) of the octamer. In contrast to this trend, the Cu–Cu bond length (2.55 Å) is shorter in the 3D layered structure than the 2D planar isomer (3.35 Å). Thus, 2D to 3D structural transition of CuO clusters strengthens the Cu–Cu bond (3.35 to 2.55 Å) at the cost of weakening the Cu–O bond (elongation from 1.73 to 1.95 Å). This also corroborates with the change in the Cu–O–Cu bond angle, which reduces from ∼132° to ∼98°. In addition, the planar to 3D transition is governed by energy economy of the Cu–O bond and Cu–Cu bonds. For the planar ring isomers up to n = 7, while the number of strong Cu–O bond increases systematically, the Cu–Cu interaction decreases because of larger separation between them. Since Cu–O bonds are stronger than Cu–Cu bonds, the planar structures could sustain by energy gain arising from the limited number of Cu–O bonds. However, at the size n = 8, the larger ring could not get stabilized itself by the Cu–O bonds only and it turned to a 3D structure as it could provide weaker (longer) but a larger number of Cu–O bonds assisted by a good number of Cu–Cu interactions in the bonding range (∼2.3 Å). It is clear from the above discussion that the structure of the (CuO)n cluster is the net result of energy economy achieved by adjusting the number of stronger Cu–O bonds along with simultaneous formation of an appropriate amount of relatively weaker Cu–Cu bonds in the given structure.
For higher clusters, the trend of stacked layer structure continues. The lowest energy isomer of (CuO)9 forms by stacking three trimer units of (CuO)3 in a staggered fashion. The average Cu–O and Cu–Cu bond distances are 1.90 and 2.65 Å, respectively. In the middle layer, the Cu–O bond distance was found to be similar to the upper and lower layer; however, the Cu–Cu distance increases drastically to ∼4 Å leading to elongation at the middle of the tubular structure. Thus, the three-dimensional stacked layer structure adopts a barrel-like structure. The barrel form of the nonamer (CuO)9 is not reported in the literature. For decamer (CuO)10, the lowest energy isomer follows a layer growth motif where one monomer unit is attached on top of a nonamer unit (Structure 10a in Table S1, ESI†). However, when the hybrid energy functional (HSE06) is used, a symmetric layer-type structure consisting of two pentamer units in a staggered fashion is found to be the most stable isomer for (CuO)10 as shown in Fig. 1. It may be noted here that although the most stable isomers obtained using the PBE and hybrid functional (HSE06) are apparently different, both isomers inherently follow the layer growth motif. This layer growth motif continues for (CuO)11 where the most stable isomer is obtained upon optimizing one trimer unit on the octamer structure in a staggered configuration (4 × 4 × 3 configuration). For the dodecamer of copper oxide (CuO)12, a large number of initial structures have been optimized. The lowest energy isomer forms a barrel-type structure where three tetramer units of (CuO)4 are stacked in a staggered fashion and the Cu–O and Cu–Cu bonds in the middle layer are slightly elongated as compared to the top and bottom layer. Thus, we call it a 4 × 4 × 4 layer structure with a barrel shape. For comparison, we have also optimized other layer structures like 3 × 3 × 3 × 3 tetra-layer and 6 × 6 bi-layer. The results show that they are 0.93 and 2.0 eV higher in energy, respectively. Here it is worth mentioning that we have carried out the calculation of vibrational frequency for all the optimized structures of CuO clusters (n = 1–12), which shows no imaginary frequency (Table S4 in ESI†) indicating that the structures are not at a saddle point.
After establishing the equilibrium geometries of the (CuO)n clusters (n = 1–12) using both the PBE and hybrid functional (HSE06) it may be worth discussing the differences in the structures obtained. It is noted that the Cu–O and Cu–Cu bond length of the optimized structure in the two functionals are similar; however, the Cu–O–Cu bond angles are more in the hybrid functional (HSE06) leading to a more open structure of the ground state isomer.
Species | Neutral | Cation | Anion | ||||||
---|---|---|---|---|---|---|---|---|---|
Avg. interatomic distance | Avg. Cu–O–Cu bond angle (°) | Avg. interatomic distance | Avg. Cu–O–Cu bond angle (°) | Avg. interatomic distance | Avg. Cu–O–Cu bond angle (°) | ||||
Cu–O (Å) | Cu–Cu (Å) | Cu–O (Å) | Cu–Cu (Å) | Cu–O (Å) | Cu–Cu (Å) | ||||
CuO | 1.80 | — | — | 1.90 | — | — | 1.74 | — | — |
(CuO)2 | 1.91 | 2.48 | 81.1 | 1.97 | 2.75 | 88.8 | 1.93 | 2.35 | 75.4 |
(CuO)3 | 1.85 | 2.87 | 101.9 | 1.84 | 3.17 | 119.6 | 1.86 | 2.67 | 91.6 |
(CuO)4 | 1.83 | 3.01 | 110.4 | 1.82 | 3.29 | 130.0 | 1.84 | 2.77 | 98.1 |
(CuO)5 | 1.81 | 3.17 | 122.5 | 1.80 | 3.34 | 135.4 | 1.80 | 3.09 | 118.6 |
(CuO)6 | 1.79 | 3.27 | 131.5 | 1.80 | 3.38 | 140.6 | 1.79 | 3.20 | 127.2 |
(CuO)7 | 1.79 | 3.33 | 137.8 | 1.79 | 3.40 | 145.6 | 1.79 | 3.27 | 132.3 |
(CuO)8 | 1.98 | 2.60, 3.17 | 82.2, 113.6 | 1.95 | 2.75, 3.32 | 89.1, 121.1 | 1.96 | 2.67, 3.13 | 84.2, 111.1 |
(CuO)9 | 2.05 | 2.83, 4.31 | 93.2, 129.9 | 1.98 | 2.81, 4.05 | 92.7, 147.6 | 2.00 | 2.76, 3.96 | 90.7, 123.4 |
(CuO)10 | 1.93 | 3.37 | 87.1, 125.7 | 1.93 | 3.42 | 90.3, 130.2 | 1.95 | 3.30 | 86.1, 122.4 |
(CuO)11 | 1.95 | 3.2 | 88.2, 112.9, 141.9 | 1.94 | 3.22 | 93.3, 116.2, 142.6 | 1.97 | 3.13 | 87.4, 110.1, 133.1 |
(CuO)12 | 1.94 | 3.02, 3.83 | 106.1, 143.4 | 1.96 | 3.11, 4.01 | 110.5, 141.4 | 1.97 | 3.03, 3.96 | 105.9, 137.7 |
On the basis of the previous description on the lowest energy isomers of (CuO)n clusters, it is felt that both tetramer and octamer clusters need additional discussion as the first one is being used as a building block and the latter one shows onset of a three-dimensional structure. In order to correlate the electronic structure with atomic structure, an in-depth analysis of PDOS for the (CuO)4 and (CuO)8 clusters has been carried out. In particular, the nature of the PDOS has been viewed from the perspective of bonding, and dimensionality. In Fig. 3, we have shown a comparison of the PDOS pattern between the 2D and 3D isomers of the (CuO)4 and (CuO)8 clusters. The planar structure of (CuO)4 shows shorter Cu–O (∼1.75 Å) and longer Cu–Cu (∼2.9 Å) bonds in the molecular plane. In contrast, the 3D isomer of (CuO)4 (structure 4d in Table S1, ESI†), which is 2.49 eV higher in energy, shows a decrease in the Cu–Cu bond (from 2.9 to 2.6 Å) and increase in the Cu–O bond (1.75 to 1.93 Å) (Table 1). Thus, the higher energy 3D isomer has greater Cu–Cu interactions. This leads to enhanced d–d mixing across the energy scale. Noticeably, all five d-orbitals contribute to the Fermi level along with the oxygen states for the 3D tetramer unit. In contrast, the ground state planar isomer has a smaller Cu–Cu interaction and larger Cu–O interaction in the molecular plane leading to a lower extent of d–d mixing across the energy scale and only the dyz and dxy states contribute to the Fermi level along with the p-states of the oxygen atoms. The Cu–O bond strength (∼1.22 eV per atom) is higher than the Cu–Cu bond strength (∼1.03 eV) (Table S3, ESI†). Therefore, it is expected that Cu–O interaction will influence the extent of mixing of Cu and O atom energy states/orbitals more in comparison to Cu–Cu interaction (d–d mixing). Indeed, the same is visible in the (CuO)4 tetramer unit. Moreover, the planar tetramer has fewer states at the Fermi level than at the deeper energy scale. As the size increases, a similar trend continues up to heptamer (n = 7), i.e., limited d–d mixing across the energy scale and Fermi level has smaller energy states with a major contribution from d-states of Cu and p-states of oxygen. These observations are in line with the fact that (CuO)5, (CuO)6 and (CuO)7 have a lower number of Cu–Cu interactions with a longer Cu–Cu distance (∼3 Å or more). However, at n = 8, as the dimensionality of the cluster switches from planar to 3D, two major changes are observed; (i) the Cu–O bond length increases from 1.73 Å to 1.96 Å and (ii) the number of Cu–Cu bonds as well as their strength increases (i.e., Cu–Cu interatomic distance around 2.5–2.9 Å). A larger number of Cu–Cu bonds along all dimensions leads to a significant increase in the extent of d–d mixing across the energy scale. For (CuO)8, all five d-orbitals contribute to the Fermi level with a substantial increase in the DOS along with oxygen p-states.
Fig. 3 Projected density of states (PDOS) of planar and 3D (CuO)4 and (CuO)8 clusters as a function of energy. |
The bulk CuO has a central Cu atom in the square planar configuration where each Cu atom forms four Cu–O bonds (bond distance ∼1.9 Å) and four long Cu–Cu bonds (bond distance ∼2.9 Å). Thus, each Cu atom in CuO is under a strong ligand field of four oxide ions and weak/very weak interactions with other neighboring Cu atoms. Stronger Cu–O bonds in a square planar arrangement do not favor uniform contributions from the five d-orbitals having different shapes due to geometrical constraints/dimensionality and hence they are not expected to mix uniformly while interacting with the oxide ligand (Fig. 4). This feature was indeed manifested in the PDOS (Fig. S1, ESI†), as the dyz, dxy and dxz states have wide dispersion from the Fermi level to −8 eV, while the dz2 and dx2−y2 states are primarily dispersed in a narrow region around −4 eV. Stronger Cu–O interaction and weaker Cu–Cu interaction in CuO bulk (with square planar CuO4 arrangements) results in less d–d mixing, which resembles the electronic structure of smaller cluster CuO (n = 3–7) having a planar configuration.
Fig. 4 A square planar motif in the structure of CuO bulk where blue and red balls indicate Cu and O atoms, respectively. |
Thus, based on the above discussion, it is clear that in general the atomic structure of (CuO)n clusters is governed by energy economy between Cu–O and Cu–Cu bonds, which correlates with their electronic structure. The 2D planar structure, with stronger Cu–O and weaker Cu–Cu interactions, shows poor d–d mixing and fewer states at the Fermi level. On the other hand, the compactness of the 3D structure quantitatively increases the Cu–Cu interaction along with a decent bond strength of the Cu–O bonds. Hence, the electronic structure of these clusters observes significant d–d mixing and substantial energy states at the Fermi level. Thus, the strong correlation between the atomic structure and electronic structure of the (CuO)n clusters is demonstrated based on a systematic evolution of the growth pattern vis-à-vis their electronic structure analysis.
Cluster size | Binding energy/CuO unit (eV) | Δ2E (eV) | Mag. Mom. |
---|---|---|---|
1 | — | — | 1.00 |
2 | 1.46 (1.82) | 1.18 | 2.00 |
3 | 2.34 (2.72) | −0.53 | 3.00 |
4 | 2.64 (3.07) | −0.50 | 2.00 |
5 | 2.73 (3.20) | 0.29 | 3.00 |
6 | 2.83 (3.26) | −0.47 | 6.00 |
7 | 2.84 (3.27) | 2.66 | 7.00 |
8 | 3.18 (3.38) | −1.98 | 0.00 |
9 | 3.22 (3.43) | 0.25 | 1.00 |
10 | 3.28 (3.46) | −0.55 | 2.00 |
11 | 3.29 (3.54) | 2.10 | 3.00 |
12 | 3.46 (3.64) | — | 0.00 |
Fig. 5 Binding energy of the copper oxide cluster/CuO unit as a function of cluster size. All energy values are derived from total energy calculations using the hybrid functional (HSE06). |
In order to understand the relative stability of a cluster with respect to the nearest neighbor, the second derivative of energy (Δ2E) has been calculated and listed in Table 3 and plotted as a function of cluster size in Fig. 6. It shows that among different clusters, trimer, tetramer, hexamer, octamer and decamer have negative Δ2E value. Negative Δ2E value indicates stability of these clusters as compared to the nearest neighbor. The octamer has the most negative Δ2E value, which is attributed to the non-planar structure of (CuO)8 where the number of Cu–O bonds increases drastically along with more Cu–Cu bonds as compared to the linear structure of the heptamer.
Fig. 6 Second derivative energy value (Δ2E) of the copper oxide clusters as a function of cluster size using the hybrid functional (HSE06). |
On the basis of the energetics of the neutral and cation clusters, the ionization energy of the copper oxide clusters has been calculated and listed in Table 4. From this table it is evident that the adiabatic ionization energy lies in the range of 8–9 eV except for the octamer and dodecamer. The octamer and dodecamer show exceptionally low ionization energy in the range of 5.5–6 eV, which is very close to the work function (5.3 eV) of CuO bulk.51 The observation of a low ionization energy for (CuO)8 and (CuO)12 makes them a potential reducing agent in a chemical reaction. To estimate the electron affinity of these clusters, we have optimized the anionic clusters. It is seen that the electron affinity increases with cluster size and most of the cluster species have a very high electron affinity, which is in the range of 3.2–4.2 eV, indicating their ability as strong oxidizing agents. Most interestingly, for (CuO)8 and (CuO)12, the electron affinity is found to be much higher as compared to the other clusters and it is in the range of ∼6.5 eV. As the electron affinity of these species exceeds that of chlorine, which has the highest electron affinity (3.7 eV) in the periodic table, these species can be termed as ‘super-halogens’ and can be used as a potential oxidizing agent.
Species | AIE (in eV) | EA (in eV) |
---|---|---|
CuO | 9.13 | 1.24 |
(CuO)2 | 8.77 | 2.14 |
(CuO)3 | 8.70 | 3.23 |
(CuO)4 | 8.53 | 3.82 |
(CuO)5 | 8.51 | 3.93 |
(CuO)6 | 8.10 | 3.98 |
(CuO)7 | 7.75 | 3.99 |
(CuO)8 | 5.62 | 6.43 |
(CuO)9 | 8.30 | 4.18 |
(CuO)10 | 7.68 | 3.96 |
(CuO)11 | 8.17 | 4.17 |
(CuO)12 | 5.97 | 6.54 |
Footnote |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d3cp06235j |
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