Teresa
Cardona-Lamarca‡
a,
Thomas Y.
Baum‡
b,
Rossella
Zaffino
*a,
Daniel
Herrera
a,
Raphael
Pfattner
a,
Silvia
Gómez-Coca
cd,
Eliseo
Ruiz
*cd,
Arántzazu
González-Campo
*a,
Herre S. J.
van der Zant
*b and
Núria
Aliaga-Alcalde
*ae
aICMAB-CSIC (Institut de Ciència dels Materials de Barcelona), Campus de la Universitat Autonoma de Barcelona, 08913, Bellaterra, Spain
bKavli Institute of Nanoscience, Delft University of Technology, Lorentzweg 1, 2628 CJ Delft, The Netherlands
cDepartament de Química Inorgànica i Orgànica, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain
dInstitut de Química Teòrica i Computacional, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain
eICREA (Institució Catalana de Recerca i Estudis Avançat), Passeig Lluís Companys 23, 08018 Barcelona, Spain. E-mail: nuria.aliaga@icrea.cat
First published on 6th September 2024
Exploiting the potential of curcuminoids (CCMoids) as molecular platforms, a new 3.53 nm extended system (pyACCMoid, 2) has been designed in two steps by reacting a CCMoid with amino-terminal groups (NH2-CCMoid, 1, of 1.79 nm length) with polycyclic aromatic hydrocarbon (PAH) aldehydes. CCMoid 2 contains pyrene units at both ends as anchoring groups to optimize its trapping in graphene nano-junctions created by feedback-controlled electro-burning. The measured I–V characteristics show gate-dependent behaviour at room temperature and 10 K, with increased conductance values compared to shorter CCMoids previously reported, and in agreement with DFT calculations. Our results show that the adjusted molecular design improves the conductance, as system 2 separates the conductive backbone from the anchor groups, which tend to adopt a planar configuration upon contact with the graphene electrodes. DFT calculations using Green functions of a set of different molecular conformations of 2 on graphene electrodes show a direct relationship between the units (e.g. pyrene, amide, etc.), in the molecule, through which electrons are injected and the conductance values; where the size of the spacing between the graphene electrodes contributes but is not the dominant factor, and thus, counter-intuitively the smallest spacing gives one of the lowest conductance values.
Modifications of the terminal groups also enable π–π coupling with graphene electrodes. In this topic, we have synthesized a family of CCMoids containing small polycyclic aromatic hydrocarbons (PAHs, anthracene units, Fig. 1a and b) as anchoring groups and varying the CCMoid chain dimensions, from 7 carbons (9ACCM, Fig. 1a) to 11C (9ALCCM, Fig. 1b), respectively. Such systems were studied on three-terminal hybrid devices, with graphene flakes as the source and drain electrodes and Si as a gate, respectively, separated by SiO2 (insulator).9–11 The motivation for such layout was given by the low atomic mobility of graphene at room temperature, its convenient work function suitable for matching the discrete energy levels of the molecules and the reduced shielding of the gate electrode potential.12,17–19 For standard-sized molecules to form effective bridges between graphene-based electrodes, they must be separated by nanogaps of approximately 1–2 nm, and feedback-controlled electroburning is normally used to create them.9 Thus, 9ACCM and 9ALCCM (Fig. 1a and b) were embedded between few-layer graphene (FLG) electrodes.9,10 Our studies showed that the longer the molecule (maintaining conjugation), the better the coupling with the FLG electrodes, finding for 9ALCCM the coexistence of vibrational excitations with Coulomb blocking physics at low temperature, a feature that was not observed for the former.10 The comparison also concluded that the enhanced coupling between the graphene flakes and the anthracene groups compensates for the final electronic transport of the molecules, yielding conductance values of the same order for the two systems (approximately 10−6G0). The proposed route provided exciting results, but the methodology of adding double bonds to the CCMoid chain cannot be explored indefinitely, as it not only increases the molecular dimensions, but also the number of conformations which hinders the linear arrangement of the molecules.
Fig. 1 Chemical structures of (a) 9ACCM and (b) 9ALCCMoid emphasizing the increased backbone length, previously studied in graphene-hybrid molecular junctions.9,10 (c) Synthetic pathway of (d) pyACCMoid (2): (i) inclusion of the spacer group through a Pabon's modified reaction and (ii) addition of the anchoring group by the formation of the amide bond. The pyrene groups stabilize the molecule in the junctions through π–π stacking to the electrodes. (e) Chemical structure of pyACCMoid integrated into a (f) three-terminal single-layer graphene (SLG) device where a doped silicon substrate is covered with 300 nm of thermal SiO2 and used as a back-gate to modulate charge transport of the molecule trapped in graphene nano-gaps opened by feedback controlled electro-burning. |
In this article we report a new derivative of the CCMoid family, with optimal dimensions and anchoring groups, which maintains a planar structure when incorporated between graphene electrodes and, as a consequence, produces a higher conductance compared to previous studies. First, we describe a synthetic approach to CCMoid elongation different from that mentioned above, using a standard CCMoid (NH2CCMoid, 1, Fig. 1c) with terminal groups capable of further reacting with PAH units. This gives rise to a new CCMoid (pyACCMoid, 2, Fig. 1e), with the typical 7C skeleton but with extended aromatic arms. Here we have explored the amide bond, between the terminal amines of CCMoid 1 and the carboxylic groups of a pyrene derivative. Tests with an analogue of this CCMoid using an imine bond were abandoned because the system was unstable in solution over time (not shown). Also, pyrene is known to provide a reliable π–π molecule-graphene bond without compromising the solubility in organic solvents of the molecular systems.20 One of the advantages of this procedure is that CCMoids (e.g.: 1) can be synthesized in a one-step reaction.18 Therefore, by carefully choosing the final elements, we can simplify the addition of functional groups of interest. The concept can be extrapolated to other reactive units, but this is beyond the scope of this work. Certainly, CCMoid 2 exhibits extended dimensions, while maintaining CCMoid conjugation and some flexibility, through the amine bond, enhancing its π–π interaction capability for better accommodation between single-layer graphene electrodes (Fig. 1f). Second, we show how our devices are now fabricated on commercially available substrates and how nanogaps are formed by electroburning on a single layer graphene21 with the advantage of being able to integrate most of the fabrication steps into standard semiconductor processing. We then present experimental studies of their single-electron transport properties that corroborate that the electronic behaviour benefits from the tailored molecular design. Third, we support the experimental results with DFT calculations and provide a deeper understanding of the findings by studying a set of possible configurations of the graphene/pyACCMoid/graphene system, analysing the relationship between the molecular groups at which the electron is injected and the conductance values achieved, discussing factors such as the spacing between graphene electrodes and the symmetric/asymmetric arrangement of the CCMoid.
As discussed above, NH2CCMoid (1) has been reacted with PAH-based units having a terminal acidic group giving rise to a PAH-CCMoid using amide bonds: pyACCMoid (2) (Fig. 1e). Optimal conditions for the synthesis of 2 include the use of a microwave (MW) reactor.23–25 Like 1, the new system has been characterized in a similar manner (Fig. S12–S17†) finding EG_el and EG_op values of 2.4 and 2.5 eV, correspondingly. The comparison of the HOMO–LUMO gaps estimated for systems 1 and 2 agrees well with what is expected for the more donor character of the amino group (in NH2CCMoid, 1) versus the amide group (in pyACCMoid, 2) which is more acceptor, being the gap smaller for the former (Fig. S18†). The data agree with Density Functional Theory (DFT) calculations performed for the two systems (Fig. S19–S21†), summarised in Table S1,† and with additional theoretical studies on CCMoids.26 Regarding the molecular size, the optimised theoretical structure shows dimensions between the most distant C atoms of 3.53 nm for 2, which is substantially longer compared and previously published systems (9Accm and 9ALCCM, Fig. 1a and b) with distances of 1.68 and 2.07 nm, respectively. Furthermore, it is interesting to emphasise the rotational nature of the amide bond,27 which provides additional degrees of freedom to the CCMoid when accommodating between the graphene electrodes during the deposition process (see the DFT section and ESI†).
Opened constrictions are measured in vacuum and at room temperature by applying a bias voltage (V) and measuring the output current (I) and display the typical tunnel I–V characteristics (see inset of Fig. 2a and S24–S25†), indicating that the GNJs are in the order of a few nanometers. Their sizes can be estimated by using the Simmons model28 with the tunnelling barrier height (determined by the work function of the electrodes), the width, and the area in the bias-voltage response window, as fit parameters (see ESI†). The overview of experiment statistics, based on the measurement of the zero-bias resistance after each step, i.e., electro-burning, molecule deposition, and cooling down, is detailed and discussed in the ESI (Fig. S23†). Before molecule deposition, the current measurement at fixed bias, as a function of the gate voltage applied at the Si bottom substrate, represented in Fig. 2b (referred to as a “gate-sweep” in the following) does not show any current modulation. The same is observed for the I–V characteristics measured as a function of gate voltage and shown in Fig. S25.† This and the nanometric size of the junctions imply that they can be used in the subsequent measurements. Molecules are deposited by dip coating the electro-burnt devices in a 0.1 mM solution of pyACCMoid (2), in THF for 1 hour, followed by rinsing with pure THF (an AFM picture of optimization of the surface functionalization is shown in ESI Fig. S26†). The solvent is chosen to dissolve the molecular compound without altering the graphene surface. Before starting the measurements, the samples are left in air for 30 min, and dried under vacuum for another 30 min more, to ensure complete solvent evaporation. We started the electrical characterization of the molecular devices at room temperature in vacuum (10−5 mbar) observing a resistance decrease of an order of magnitude, or higher, in about 12% of the devices incubated, suggesting the presence of molecules inside the GNJ (see Fig. S23† for the overview of the experiment statistics). We observed current variations in the order of a few picoamperes distinct from noise in the gate-sweep measurements shown in Fig. S27.† We note a resistance variation of about an order of magnitude in the I–V characteristics, measured as a function of bias and gate voltage and compiled in the stability diagram shown in Fig. S28.†
Fig. 2 (a) Current vs. bias voltage (I–V) characteristic of devices through the different steps of the experiment: right after the electro-burning procedure (empty device, yellow curve) and after molecular deposition: in high current (ON) and blockaded regions (OFF) measured at 10 K. Empty devices display an order of magnitude lower current and non-linear increase at high voltage bias values, as depicted in the inset. (b) Current between the source and drain for a fixed bias voltage of 10 mV as a function of gate voltage (gate-sweep) before (blue, room temperature) and after (orange, 10 K) deposition of molecules. The low-temperature gate-sweep displays a clear current increase attributed to molecular resonances; the room-temperature gate-sweeps also exhibit features in the current shown in Fig. S27.† (c) Current as a function of source–drain bias and gate voltage (stability diagram) measured at 10 K. Alternating regions of high (ON) and low (OFF) current are visible giving rise to diamond-shaped areas (corresponding line cuts are shown in (a)). |
At low temperatures (10 K), the conductance modulations in the gate sweeps become more defined, as seen in Fig. 2b (orange trace). This is also seen in the significant current enhancement measured in the “ON” state and represented in Fig. 2a showing an asymmetric current response to the voltage application which origin will be discussed in relation with results from theoretical modelling. We observed, as elsewhere reported, that cooling may cause some open GNJs to close, and the opposite, some closed GNJs to open, highlighting the presence of tensile stress building up in the graphene monolayer as the temperature changes. From over 39 junctions measured at low temperatures, 12 displayed resistances in the range expected for a molecule bridging electrode (hundreds of MΩ up to GΩ), among which two showed evidence of molecular signatures in the gate voltage range accessible (Fig. 2b and S29†). DFT calculations confirm such transport properties by comparing them with the energy of the charge state of the molecule.29 The energies involved in the oxidation/reduction processes of molecule 2 show, also in agreement with the electrochemical data, a greater number of reduction processes (Fig. S29(c)†). The yield is close to values reported in the literature for devices fabricated with a similar procedure.20 We observed variations of the current intensity measured in the gate-sweep between different devices (as highlighted for the two molecular junctions measured at low-temperature in Fig. S29 and S30†) as well as on repeated measurements on the same device, also seen in the slight shifting of the resonances between Fig. 2b and c causing a minor difference between the gate voltage at which they occur. These variations can be attributed to the different molecular conformations within the junction, as supported by the results of the DFT calculations showing the relevance of the spatial configuration of the molecule within the junction and will be further discussed in the theoretical section.
In GNJs, molecular species commonly present weak/intermediate coupling9–11 to the source and drain graphene electrodes, resulting in charge transport dominated by single-electron transistor (SET) behaviour. In our case, the pyrene units are the main anchor to the graphene electrodes, leading to current suppression (Coulomb blockade) when the molecular energy level falls outside the bias voltage range. By applying a gate voltage, the molecular orbital levels align with the chemical potential of the electrodes causing resonant charge transport, as evidenced by current resonances in gate-sweeps (Fig. 2b, orange trace) and Coulomb Diamonds (CD) in the stability diagram characterized by current-blockaded regions (Fig. 2c, whitish areas) alternating with resonant transport regions (Fig. 2c, blue and red areas). Resonant peaks correspond to a change in the ground state of the molecule, indicating a transition of its electronic state at zero bias voltage. This point is referred to as the charge degeneracy point (CDP). A comparison of the stability diagrams of the previously published 9ACCM and 9ALCCM systems9,10 with that of CCMoid 2 shows that the signal intensity has now increased, confirming charge transport enhancement of our new system.
The gate coupling, α, can be extracted from the slopes of the Coulomb diamonds, β and γ (as explained in the ESI and illustrated in Fig. S31†). We find α = 0.005 (0.5%) for the diamond around VG = −25 V and α = 0.011 (1.1%) for that around VG = −8 V. These values are in the lower range expected for graphene-based molecular junctions in three-terminal devices with 300 nm of SiO2 as a gate dielectric.30 We have also calculated the gate couplings for both diamonds of the second device (shown in Fig. S32†), reporting a large difference between the two accompanied by opposite source-drain coupling asymmetry. Both observations point to a different origin of the corresponding CDPs in this case, as discussed in the ESI.† For both molecular junctions, we find similar and large addition energy spacing (more than 400 meV). Large addition energies are usually observed in molecular junctions as opposed to a graphene island associated with a lower, and more variable, addition energy.31 It should be also stressed that in graphene-based molecular junctions, the gate field can affect the chemical potential of the electrodes giving rise to spectroscopic features associated with quantum interferences from the electrodes that are not intrinsic to the molecule30,32 and limiting the possibility of measuring accurately the molecular resonances. This has been already observed30,32 and here it is supported by the presence of lines not running parallel to the diamond edges (as displayed in the conductance map shown in Fig. S32(a)†).
In addition, we considered a set of scenarios resulting from combining different gap sizes and arrangements of 2 in the gap. We analysed the configurations produced by the attachment of the different CCMoid moieties (diarylheptanoid chain/phenyl/amide/pyrene) to the graphene electrodes together with symmetric/asymmetric molecular arrangements with respect to the electrodes. Among all possibilities, we restricted our study to those shown in Fig. 3. For that, we took as reference the arrangement called 2A (described above), with the pyACCMoid disposed symmetrically between the electrodes spanning a gap of approximately 1.5 nm, with the amide-pyrene groups anchoring to the graphene electrodes. The additional configurations display shorter (σ) and longer (λ) gaps where CCMoid 2 appears to be attached to the graphene edges either symmetrically (Fig. 3, 2Bσ, 2Cλ and 2Dσ) or asymmetrically (Fig. 3, 2Aas, 2Eλ-as and 2Eλ-as-inv), respectively. Among the asymmetric cases (2Eλ-as), a reversed situation (2Eλ-as-inv) was also considered. For all of them, the size of the gap was estimated considering the first C/N/O atoms (from the CCMoid) that come into contact with each side of the electrodes. The calculations were carried out as for 2A, and Fig. 3 (centre) depicts the transmission spectra surrounded by the corresponding DFT optimised structures for all the different configurations.
The theoretical values of the conductance for the seven models in Fig. 3 have been calculated using the value of the transmission at the Fermi level (Table 1). Among the symmetric systems, 2Bσ, with a relatively short gap (1.1.–1.2 nm, smaller than 2A), shows the highest conductance value. However, according to the calculations, the size of the gap is not the main determinant of the conductance values. This is evident in the 2Dσ system, whose distance between the graphene electrodes is the shortest but provides the lowest conductance value. To understand the results obtained it is necessary to consider that transport in this type of device will involve the injection of electrons from the left electrode (source) to the molecule, as can be seen in the transmission pathway in Fig. S34.† By sorting the conductance data obtained by transmission in decreasing order and comparing them with which part of the molecule is in contact with the edge of the left electrode (see Table 1 and Fig. 3), it is clearly observed that the devices with the phenyl group in that position (2Bσ and 2Aas) are those with the highest conductance values (electron injection is more effective). Between these two values, the one with the smallest nanogap (2Bσ) also benefits from this fact, presenting the highest conductance value among them.
2Bσ | 2Aas | 2Eλ-as-inv | 2Cλ | 2Dσ | 2A | 2Eλ-as | |
---|---|---|---|---|---|---|---|
Conductance T Fermi level (10−4G0) | 2.8 | 1.2 | 0.80 | 0.49 | 0.32 | 0.23 | 0.16 |
Contact group of 2 with the left electrode (source) | Phenyl | Phenyl | Pyrene | Pyrene | Diarylheptanoid chain | Amide | Amide |
Gap (nm) | 1.1–1.2 | 1.5 | 2.0 | 2.2–2.3 | 0.7 | 1.5 | 2.0 |
The next two configurations in order of the highest conductance values are 2Eλ-as-inv and 2Cλ, which feature the longest nanogaps (2.0 nm and 2.2–2.3 nm, respectively) and the contact with the molecule is through the pyrene group. Comparison of these two cases again indicates how, in the presence of a similar contact between the molecule and electrode, the one presenting the smaller nanogap provides a higher conductance value (2Eλ-as-inv). The three lowest conductance values correspond to molecule–electrode contacts that do not occur through aromatic rings of the molecule. The most striking case is the system 2Dσ, which, despite having the smallest nanogap, has the lowest conductance value, contacting the edge of the source through the double bonds of the diarylheptanoid chain in 2. Finally, the two lowest values (2A and 2Eλ-as) occur when the contact is through the amide group of 2, and again there is a higher value for the case with a smaller nanogap (2A). These results demonstrate that the presence and arrangement of the aromatic rings, in the molecule–electrode contact area, is critical to obtain high conductance values and that, in cases with similar contacts, a smaller nanogap also improves transport.
Back to the calculated I–V plots (Fig. S35†), an interesting point is the presence of negative differential conductance (NDC) observed for the systems with the largest gaps, 2Cλ, 2Eλ-as and 2Eλ-as-inv, respectively. Experimental signatures of NDC can be spotted in the bottom part of Fig. S32(a),† however, it should also be pointed out that in experimental measurements NDC features could be due to various reasons. From a theoretical point of view, the NDC originates from the energetic disposition of the transmission peaks in the width-dependent bias windows and by the degree of localization of the transmission eigenfunctions. This behaviour is seen in Fig. S36† where the transmission of the most important peak (indicated with an asterisk) decreases its energy within the potential window when a voltage of 0.5 V instead of 0.4 V is applied. Likewise, the transmission function increases its location on the left side of the CCMoid at the higher voltage with respect to the lower one.
It is important to note that only when the molecule is symmetrically coupled to both electrodes, the transmission function is symmetrical with the applied voltage, for positive and negative energy values. In all the other cases, we see that when the molecule–electrode coupling is asymmetric, the enhancement of the transmission function is different for positive/negative energy values giving rise to the asymmetric current response seen in the theoretical I–V plots in Fig. S35† for the 2Aas and 2Eλ-as configurations. Given the limited knowledge of the experimental gap size, it is not trivial to find an exact connection between theoretical and experimental results. However, the appearance of asymmetry in the experimental I–V data suggests that the experimental conformation could be similar to one of the two theoretical configurations that give an asymmetric theoretical I–V response. Finally, we recall that the existence of different binding configurations is common in these experiments where there is no control over the landing of the molecule on the electrodes. Switching between different configurations could affect the reproducibility of the measurements over time and limit the accurate characterization of the molecular resonances.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d4sc04969a |
‡ All the authors contributed equally. |
This journal is © The Royal Society of Chemistry 2024 |