Rasitha Manha
Veedu
,
Zulema
Fernández
,
Nils
Bäumer
,
Antonia
Albers
and
Gustavo
Fernández
*
Universität Münster, Organisch-Chemisches Institut, Corrensstraße 36, Münster 48149, Germany. E-mail: fernandg@uni-muenster.de
First published on 11th June 2024
In controlled supramolecular polymerization, planar π-conjugated scaffolds are commonly used to predictably regulate stacking interactions, with various assembly pathways arising from competing interactions involving side groups. However, the extent to which the nature of the chromophore itself (planar vs. non-planar) affects pathway complexity requires clarification. To address this question, we herein designed a new BOPHY dye 2, where two oppositely oriented BF2 groups induce a disruption of planarity, and compared its supramolecular polymerization in non-polar media with that of a previously reported planar BODIPY 1 bearing identical substituents. The slightly non-planar structure of the BOPHY dye 2, as evident in previously reported X-ray structures, together with the additional out-of-plane BF2 group, allow for more diverse stacking possibilities leading to two fiber-like assemblies (kinetic 2A and thermodynamic 2B), in contrast to the single assembly previously observed for BODIPY 1. The impact of the less rigid, preorganized BOPHY core compared to the planar BODIPY counterpart is also reflected in the stronger tendency of the former to form anisotropic assemblies as a result of more favorable hydrogen bonding arrays. The structural versatility of the BOPHY core ultimately enables two stable packing arrangements: a kinetically controlled antiparallel face-to-face stacking (2A), and a thermodynamically controlled parallel slipped packing (2B) stabilized by (BF2) F⋯H (meso) interactions. Our findings underscore the significance of planarity breaking and out-of-plane substituents on chromophores as design elements in controlled supramolecular polymerization.
When considering the extensive literature on self-assembled π-conjugated systems, researchers often exploit the inherent planarity of π-conjugated scaffolds and dye molecules as a means to predictably control their stacking arrangements.40,41 Although much less studied, non-planar π-conjugated molecules also demonstrate extended self-assembly potential in solution, given appropriate functionalization.42–44 However, an unexplored aspect is whether the sole disruption of planarity in π-systems may originate multiple assembled states using the same building block. In this context, tetracoordinated organoboron dyes represent an ideal choice to investigate such effects, given that the typically used boron difluoride groups (BF2) are arranged out of plane and, thus, may induce molecular distortions. In addition to the well-known boron dipyrromethene (BODIPY) dyes,45–48 where the BF2 is linked to a dipyrromethene core, various analogous scaffolds, including azaBODIPYs,12 BODIHYs (hydrazones),49,50 boron-locked anilido pyridines,51 bis(borondifluoride)-8-imidazodipyrromethenes (BOIMPYs)52 and azaBOIMPYs,53 have been developed to leverage the photophysical properties and applications of this class of dyes. A particularly notable scaffold from the structural viewpoint is the BOPHY core (bis(difluoroboron)-1,2-bis((1H-pyrrol-2-yl)methylene)hydrazine), featuring two BF2 groups within a tetracyclic pyrrole-boron difluoride structure.54 Its structural resemblance to BODIPY, coupled with the non-planarity evident in its crystal structure,54 renders it an ideal candidate for exploring the impact of planarity disruption on complex supramolecular polymerization.
In this work, we demonstrate that planarity breaking enables different supramolecular polymerization pathways with distinct molecular arrangements. To this end, we designed a new π-extended BOPHY dye containing amide groups and solubilizing alkyl side chains (2) and compared its supramolecular polymerization in non-polar media with that of a previously reported BODIPY analogue (1) with identical substituents (Scheme 1). Detailed spectroscopic investigations in methylcyclohexane (MCH) revealed that the BOPHY derivative (2) exists as either of two assembled states (2A & 2B), unlike the BODIPY counterpart (1), which forms only one assembled state (1A).39,55 Interestingly, both 2A & 2B are described by a cooperative mechanism, which is reflected in the formation of elongated fibres for both assembled states, as imaged by atomic force microscopy (AFM) and scanning electron microscopy (SEM). In contrast, despite following the same aggregation mechanism, the corresponding BODIPY derivative (1) forms much shorter one-dimensional (1D) assemblies than the BOPHY compound (2). This may result from the higher rigidity of the planar BODIPY core compared to the BOPHY counterpart, which limits extended hydrogen bonding formation. Nuclear magnetic resonance (NMR) and Fourier-transform infrared (FTIR) spectroscopy along with theoretical calculations disclose amide–amide hydrogen bonds of similar strength for both 2A & 2B. However, the key difference is the packing mode: while H-type antiparallel face-to-face stacking interactions are observed for kinetic assembly 2A, the thermodynamic product 2B is stabilized by a parallel slipped packing and concomitant (BF2) F⋯H (meso) interactions. Therefore, the slightly non-planar structure of the BOPHY, together with the additional BF2 group, allow for more diverse stacking possibilities compared to the planar BODIPY dye. These findings underline the importance of planarity breaking and out-of-plane substituents on chromophores as design elements in controlled supramolecular polymerization.
The model BODIPY compound 1 has been thoroughly investigated in previous reports in terms of its supramolecular polymerization in non-polar solvents.39,55 This derivative was found to self-associate in MCH into 1D H-type stacks (1A) as single thermodynamic product. Irrespective of the experimental conditions (stirring, sonication, thermal or solvophobic quenching, cooling/heating and denaturation), 1 forms exclusively this self-assembled state 1A without traces of other kinetic products (Fig. 1a and b). Although 1A is formed via the cooperative mechanism, only short 1D assemblies are found in solution, which is attributed to increasing steric repulsion between the solubilizing chains hindering extended aggregate growth, as suggested by theoretical calculations.56 We argue that the modification of the BODIPY core may be an effective strategy to tune this behaviour towards more feasible elongated growth. To probe this hypothesis, the photophysical properties of the BOPHY derivative (2) were first investigated using solvent-dependent absorption and emission spectroscopy (Fig. 1c and d). At a concentration of 2 × 10−5 M, the absorption studies in moderately polar organic solvents like chloroform show spectral patterns that agree with a molecularly dissolved state (Fig. 1c), i.e. an absorption maximum at around 505 nm, corresponding to the S0 → S1 transition of the BOPHY chromophore,55 along with a shoulder at λmax = 482 nm (Fig. 1c, see also Fig. S4a† for a comparison in multiple organic solvents). The corresponding photoluminescence studies of monomeric 2 in chloroform exhibit an emission maximum at ∼546 nm along with a red shifted shoulder at 586 nm (Fig. 1d & S4b†). This trend changes considerably if the system is investigated in non-polar solvents, such as MCH, hexane, heptane or dodecane. In these media, a hypsochromic shift of the absorption maximum to 458 nm is observed with respect to the molecularly dissolved state (Δλ = 50 nm) (Fig. 1c & S4†). This self-assembled state will be termed from now on 2A. In emission studies, 2A is characterized by a sharp emission band at around 590 nm that is red-shifted compared to the molecularly dissolved state in chloroform (Δλ = 44 nm). The observed spectral features of 2A bear close resemblance to those observed for 1 (1A), which are typical for a face-to-face (H-type) stacking of the BODIPY55 as well as the BOPHY dyes.57
Variable temperature UV-vis studies (VT UV-vis) at different concentrations and cooling rates were subsequently recorded to gain insights into the self-assembly mechanism of the BOPHY derivative 2 in MCH. Upon cooling a solution of 2 from 363 K to 263 K with a ramp rate of 1 K min−1, the absorption spectrum of the molecularly dissolved state (505 nm) shifts to lower wavelengths (458 nm), which can be attributed to the self-assembled species 2A (Fig. 3a & S5†). The formation of 2A was found to be independent of the cooling rate (Fig. S5†) and concentration (Fig. S6†), as also observed in VT emission studies (Fig. S7†), indicating that only one aggregate is obtained using thermal approaches. Plotting the degree of aggregation αaggvs. the temperature from the heating and cooling experiments under similar conditions does not reveal any thermal hysteresis (Fig. S8†). This indicates that no kinetically trapped products are formed during the thermally-induced monomer-to-aggregate transition. To confirm this further, we subjected the sample to more drastic changes in the experimental conditions. Both solvophobic quenching (rapid injection of monomeric solution of 2 into an excess of MCH) as well as thermal quenching (fast cooling of a hot monomeric solution of 2 in MCH to 273 K) resulted in identical spectral features (Fig. S9a and b†), which are characteristic for the formation of aggregate 2A. Hence, a single supramolecular species has been detected by thermal approaches, similar to what was found for the BODIPY counterpart 1.55
However, dramatic differences in their time-dependent behaviour are witnessed for assemblies 1A and 2A. While 1A remains invariant over time due to its thermodynamic stability,552A forms over the course of one day at room temperature an energetically more favourable species (2B) (Fig. 2a). This transformation can be further accelerated using mechanical agitation in the form of sonication (10–20 seconds). The new self-assembled state 2B is spectroscopically characterized by an absorption maximum centred at 484 nm (blue-shifted compared to the monomer) and a second, less intense red-shifted shoulder at 530 nm (Fig. 1c and 2a, brown spectrum). Spectral patterns with both H- and J-type characteristics, such as those of 2B, are in line with the formation of HJ aggregates, as proposed in the literature.58,59 The 2A → 2B transformation is accompanied by a colour change of the solution from yellow (2A) to light pink (2B) (inset of Fig. 2a). The new aggregated species (2B, ϕF = 12%) displays a lower photoluminescence quantum yield than 2A (ϕF = 87%), which can be rationalized in different ways. The fluorescence found in aggregate 2A might likely arise from the imperfect dye arrangement, possibly caused by a molecular scaffold that is not fully planar. Furthermore, we hypothesize that there could be a reduction in non-radiative decays due to the enhanced rigidity of the molecular chains in the π–π stacked aggregate.60 The lower quantum yield of 2B could be additionally explained by weakened excitonic coupling in the aggregated state compared to 2A.61
To elucidate the nature of the 2A → 2B transformation (competitive or consecutive pathways), kinetic experiments at multiple concentrations were performed in MCH (10–40 μM) (Fig. 2a and b). As depicted in Fig. 2a, the spectral characteristics of 2A are diminished over time as the spectral features of 2B become dominant. Monitoring this transformation over time discloses a decelerated 2A → 2B conversion upon increasing the concentration, which indicates that both assembled states 2A and 2B are formed directly from the monomer, i.e. they are competitive (see energy diagram in Scheme 1 and Fig. 2b & S10†).
We next analysed the mechanism of formation of aggregates 2A and 2B by monitoring the absorption changes at a fixed wavelength against temperature during cooling experiments. In the case of aggregate 2A, thermodynamic analysis of the experimental data obtained at different concentrations revealed a cooperative supramolecular polymerization process (Fig. 3a and e). Fitting these cooling curves (1 K min−1) to the nucleation–elongation model62 gave an average Gibbs free energy of ΔG = −35.20 kJ mol−1 (Tables 1 and S1†). On the other hand, as the assembly 2B cannot be obtained by cooling experiments regardless of the cooling rate, we extracted the thermodynamic parameters from heating studies using a heating rate of 1 K min−1. These experiments revealed that the absorption pattern of the molecularly dissolved state gradually rises at the expense of the absorption features of 2B (Fig. 3b & S11†).
Aggregate | ΔG0 (kJ mol−1) VT | ΔG0 (kJ mol−1) denaturation | C–H⋯F–B distances (Å) | N–H⋯OC distances (Å) |
---|---|---|---|---|
2A | −35.20 | −35.40 | 2.468, 3.595 | 2.105, 2.263 |
2B | −42.47 | −40.68 | 1.999, 1.967 | 1.992, 2.074 |
The corresponding heating curves vs. temperature obtained at λ = 575 nm also exhibited a non-sigmoidal shape, suggesting a cooperative mechanism for aggregate 2B. Thermodynamic analysis of the plots at different concentrations (Fig. 3f) yielded a ΔG = −42.47 kJ mol−1 (Tables 1 and S2†). The lower ΔG value calculated for 2B compared to 2A demonstrates the superior stability of the former, which possibly arises from the more favourable chromophore packing arrangement. The high value of the nucleation penalty found for 2B compared to 2A suggests a higher cooperativity for the former (Tables S1 and S2†).25
Further information about the thermodynamic stability of the two assemblies was obtained by denaturation studies using CHCl3 as a denaturing solvent while monitored by UV-vis spectroscopy. Addition of aliquots of monomeric 2 in CHCl3 to the respective aggregate solutions of 2A (Fig. 3c & S12†) or 2B (Fig. 3d & S13†) at the same concentration leads to the disassembly of both aggregates directly to the monomeric species, further supporting the competitive nature of both pathways. Again, the cooperative model was employed to fit the denaturation measurements at different concentrations (Fig. 3g and h) for both aggregates.63 The thermodynamic parameters extracted from this experiment agree with the results obtained from the VT experiments and point to a higher stability of 2B (ΔG = −40.68 kJ mol−1) compared to aggregate 2A (ΔG = −35.40 kJ mol−1) (Table S3†) under the investigated conditions. The obtained energy difference between the two assembled states lies within the range of systems to be considered supramolecular polymorphs (approximately 10 kJ mol−1).64–66,68
Microscopy studies were performed to visualize the morphology of the assemblies after drop-casting their solutions onto highly oriented pyrolytic graphite (HOPG) or silicon wafer for AFM and SEM, respectively. Regardless of the employed substrate, the structures could be visualized as bundles of highly elongated fibre-like structures. AFM images of aggregate 2A showed the formation of needle-like morphologies with a height of ca. 50 nm and ca. 5–7 μm in length (Fig. 2c). In the case of 2B, elongated fibres can also be observed but with a height of approximately 150 nm and a length of ca. 3–5 μm (Fig. 2d). We infer from these results that both assemblies are significantly stabilized by hierarchical effects, leading to an efficient bundling of the structures.67,69 In the case of 2B, this behaviour is particularly pronounced (as evident from the increase in the height of the fibre bundles). We argue that this change in hierarchical interactions is driven by a decrease in the density of the solubilizing alkyl shell (vide infra), which allows the chains of neighbouring stacks to interdigitate more effectively in 2B. These observations are consistent with previous reports, which found an increased tendency to form hierarchical structures as a consequence of increased flexibility of solubilizing alkyl chains.68 In addition, polymerization processes driven by solvent–solute interactions have been demonstrated to follow a similar mechanism.69,70 The corresponding SEM studies (Fig. S18 & S19†) agree with the abovementioned results extracted from the AFM analysis, revealing less bundled fibres for 2A (Fig. S20†) and more clustered fibres for 2B (Fig. S21†) on the silicon wafer surface. TEM analysis (Fig. S22†) also reproduce the results from AFM and SEM.
In order to rationalize the differences in molecular packing, FTIR measurements as well as 1H NMR studies were performed. For molecularly dissolved 2 in CHCl3 at 1 mM (Fig. S16†), we found N–H and CO stretching bands at νN–H = 3432 cm−1 and νCO = 1673 cm−1, respectively. The FTIR spectrum of aggregate 2A (1 mM in MCH, Fig. S17†) revealed the shifting of these bands to νN–H = 3278 cm−1 and νCO = 1646 cm−1, indicating the existence of N–H⋯OC hydrogen bonds. In the case of aggregate 2B (1 mM in MCH, Fig. S17†), a slightly lower value for the N–H stretching (νN–H = 3259 cm−1) was observed, while the CO stretching band showed a similar frequency (νCO = 1646 cm−1) when compared to 2A. The slightly lower value of the N–H stretching frequency band indicates the marginally stronger amide hydrogen bonding interactions for the thermodynamic product 2B,71 while the identical CO frequencies might suggest the existence of defects in 2B. To further analyse the differences in packing of aggregates 2A and 2B, we performed 2D 1H–19F NMR spectroscopy (1H–19F HOESY NMR). We simultaneously monitored the 2D 1H–19F HOESY NMR spectra of 2A (70% MCH-d14 + 30% CDCl3) and 2B (90% MCH-d14 + 10% CDCl3) at 328 K (c = 5 mM) (Fig. 4a, c & S15†). Both aggregates revealed a strong correlation signal that corresponds to intermolecular interactions between the meso-hydrogens of the BOPHY core and the fluorine atoms connected to the boron. Additionally, both assemblies revealed a correlation between the methyl protons on the BOPHY core and the fluorine atoms, suggesting similar stabilizing interactions in both aggregates 2A and 2B, albeit with slightly different arrangements of the chromophores (Fig. 4a, c, S29 & S30†). Based on the similar 2D HOESY NMR experiment, we assume that both aggregates 2A and 2B may adopt a packing that maintains both types of hydrogen bonding interactions depending upon the feasible alignment of the BOPHY chromophore (parallel or antiparallel).
Footnote |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d4sc02499k |
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